SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for H3SC13 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  H3SC13
Domain Number 1 Region: 1-100
Classification Level Classification E-value
Superfamily ISP domain 2.88e-24
Family Rieske iron-sulfur protein (ISP) 0.021
Further Details:      
 
Weak hits

Sequence:  H3SC13
Domain Number - Region: 183-266
Classification Level Classification E-value
Superfamily Avirulence protein AvrPto 0.0366
Family Avirulence protein AvrPto 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) H3SC13
Sequence length 590
Comment (tr|H3SC13|H3SC13_9BACL) Rieske (2Fe-2S) iron-sulfur domain {ECO:0000313|EMBL:EHQ63527.1} KW=Complete proteome; Reference proteome OX=1131935 OS=Paenibacillus dendritiformis C454. GN=PDENDC454_05246 OC=Paenibacillus.
Sequence
MTDWIHAGTWEDLQEQGAKVIKGGIAVFVHADEVYAVDNRCPHMGFPLHMGSLCDGILTC
HWHHARFDVCSGGTLDPWADDVPVHRVKVEQGSVWVDPRPQVASSVEKQLRRLREGMEQN
LSLVIAKSVVALVEAGVPAADIARVGVDFGTTYRSAGWSSGLTILAAMVNVLPKLDKYGR
ILALYHGLARVARDCAGQPARFLQQPLPETEQQATEHLSAWYRRCIEVRDIRGAERVLAS
AIASGMEPNELMSMMMTAVTDHFYMDGGHTLDFHNKAFEILQHIGSDSAVRVLSSLVPLP
ARAARSEELQHWQSPVNLVDPLREAFRELESITWSAVETPASTEDTPEQAEEEEQQLLAL
LLGDQPLQTIEALTNALRSGRSPVRLAQLVALAAAERITRFHTQNEFGDWITVLHTFTHA
HAVHETLRRSANVFTVRAIYYAAVTVYLDRFLNVPAARRPSGEHAEANPNSTDPGWLLKL
LDRQQQVAESGEWLAQYLRQNGDIDALFNTLGHALLREDAEFHSYQMYEAASAEYDRWDA
ESGPLAAQAKQTMLLALTRYLAAHSPTARELPHTARIAWRLHRGEKLFEE
Download sequence
Identical sequences H3SC13
WP_006675563.1.46287

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]