SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for L8AC43 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  L8AC43
Domain Number 1 Region: 2-105
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 2.78e-39
Family Prokaryotic type KH domain (KH-domain type II) 0.0000328
Further Details:      
 
Domain Number 2 Region: 107-205
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 2.05e-37
Family Ribosomal protein S3 C-terminal domain 0.0000134
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) L8AC43
Sequence length 218
Comment (tr|L8AC43|L8AC43_BACIU) 30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309} KW=Complete proteome OX=1204343 OS=Bacillus subtilis BEST7613. GN=BEST7613_0121 OC=Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
Sequence
MGQKVNPVGLRIGVIRDWESKWYAGKDYADFLHEDLKIREYISKRLSDASVSKVEIERAA
NRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNIA
RQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRAD
IDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK
Download sequence
Identical sequences A0A164W293 A0A1B2B0W1 A0A1Y0WNK1 G4F0T1 L8AC43 P21465
gi|321313793|ref|YP_004206080.1| gi|402774364|ref|YP_006628308.1| gi|560127147|ref|YP_008828288.1| gi|255767030|ref|NP_388003.2| 224308.BSU01220 NP_388003.2.22788 WP_003235068.1.11088 WP_003235068.1.11231 WP_003235068.1.11257 WP_003235068.1.1140 WP_003235068.1.11581 WP_003235068.1.12644 WP_003235068.1.12759 WP_003235068.1.1358 WP_003235068.1.15902 WP_003235068.1.16291 WP_003235068.1.23108 WP_003235068.1.27372 WP_003235068.1.27612 WP_003235068.1.27660 WP_003235068.1.2914 WP_003235068.1.31100 WP_003235068.1.32025 WP_003235068.1.32219 WP_003235068.1.32420 WP_003235068.1.32693 WP_003235068.1.33846 WP_003235068.1.36189 WP_003235068.1.39605 WP_003235068.1.40859 WP_003235068.1.44140 WP_003235068.1.44184 WP_003235068.1.45019 WP_003235068.1.47157 WP_003235068.1.47672 WP_003235068.1.5262 WP_003235068.1.56274 WP_003235068.1.56411 WP_003235068.1.57184 WP_003235068.1.57201 WP_003235068.1.5726 WP_003235068.1.57513 WP_003235068.1.6139 WP_003235068.1.64889 WP_003235068.1.6517 WP_003235068.1.65223 WP_003235068.1.69439 WP_003235068.1.71402 WP_003235068.1.7159 WP_003235068.1.7186 WP_003235068.1.72516 WP_003235068.1.72999 WP_003235068.1.74782 WP_003235068.1.76977 WP_003235068.1.78686 WP_003235068.1.78811 WP_003235068.1.79046 WP_003235068.1.79288 WP_003235068.1.79712 WP_003235068.1.81116 WP_003235068.1.81747 WP_003235068.1.82722 WP_003235068.1.84556 WP_003235068.1.87300 WP_003235068.1.88042 WP_003235068.1.89821 WP_003235068.1.90830 WP_003235068.1.91723 WP_003235068.1.93073 WP_003235068.1.93420 WP_003235068.1.94199 WP_003235068.1.95009 WP_003235068.1.96043 WP_003235068.1.97264 WP_003235068.1.979 WP_003235068.1.99399 gi|470160273|ref|YP_007532048.1| 3j9w_AC 6ha1_c 6ha8_c gi|430755576|ref|YP_007211137.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]