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Domain assignment for O55253 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  O55253
Domain Number 1 Region: 325-492
Classification Level Classification E-value
Superfamily SARS receptor-binding domain-like 6.15e-64
Family SARS receptor-binding domain-like 0.001
Further Details:      
 
Domain Number 2 Region: 995-1108
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 2.84e-42
Family Coronavirus S2 glycoprotein 0.0000762
Further Details:      
 
Domain Number 3 Region: 1192-1290
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 2.3e-22
Family Coronavirus S2 glycoprotein 0.00094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) O55253
Sequence length 1360
Comment (tr|O55253|O55253_9BETC) Spike glycoprotein {ECO:0000313|EMBL:BAA23719.1} OX=11138 OS=Murine hepatitis virus. GN= OC=Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus.
Sequence
MLSVFILFLPSCLGYIGDFRCINLVNTDTSNASAPSVVTEVVDVSKGIGTYYVLDRVYLN
ATLLLTGYYPVDGSNYRNLALTGTNTLSLNWYKPPFLSEFNDGIFAKVKNLKASLPKDST
SYFPTIVIGSNFVSTSYTVVLEPYNGIIMASICQYTICLLPYTDCKPNTGGNKLIGFWHT
DLKSPVCILKRNFTFNVNADWLYFHFYQQGGTFYAYYADAGSATTFLFSSYIGDVLTQYF
VLPYVCTPTTTGVFSPQYWVTPLVNQYLFNFNQKGTITSAVDCASSYTSEIKCKTQSMNP
NTGVYDLSGYTVQPVGLVYRRVRNLPDCRIEDWLAAKTVPSPLNWERKTFQNCNFNLSSL
LRLVQAGSLSCSNIDAAKVYGMCFGSMSIDKFAIPNSRRVDLQLGNSGFLQSFNYKIDTR
ATSCQLYYSLAQSNVTVNNHNPSSWNRRYGFNDVATFGRGKHDVAYAEACFTVGASYCPC
ANPSIVSPCTTGKPKFANCPTGTTNRECNVLALGSNLFKCDCTCNPSPLTTYDLRCLQGR
SMLGVGDHCEGLGVLEDKCGGSNTCNCSADAFVGWAKDSCLSNGRCHIFSNLMLNGINSG
TTCSMDLQLPNTEVVTGICVKYDLYGITGQGVFKEVKADYYNSWQNLLYDVNGNLNGFRD
IVTNKTYLTRSCYSGRVSAAYHQGAPEPALLYRNLKCDYVFNNNIFREETPLNYFDSYLG
CVVNADNSTEQAVDACDLRMGSGLCVNYSTAHRARRPVSTGYKLTTFEPFTVSIVNDSVE
SVGGLYEMQIPTNFTIASHQEFIQTRAPKVTIDCAAFVCGDYTTCRQQLVEYGSFCDNIN
AILGEVNNLIDTMQLQVASALIQGVTLSSRLADGISGQIDDINFSPLLGCLGSQCSEGTM
AAQGRSTVEDLLFDKVKLSDVGFVEAYNNCTGGQEVRDLLCVQSFNGIKVLPPVLSENQV
SGYTAGATASSMFPPWSAAAGVPFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAI
QEGFDATNSALAKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQID
RLINGRLTALNAYVSKQLSDMTLIKVSAAQAIEKVNECVKSQSPRINFCGNGNHILSLVQ
NAPYGLYFLHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYFVQDDGEWKFTGSNYYYPE
PITDKNSVVMSSCAVNYTKAPEVFLNTSISNLPDFKEELDKWFKNQTSVAPDLSLDFEKL
NVTFLDLSDEMNRIQEAIKKLNESYINLKEIGTYEMYVKWPWYVWLLIGLAGVAVCVLLF
FICCCTGCGSCCFKKCGNCCDEYGGHQDSIVIHNISSHED
Download sequence
Identical sequences O55253
O55253_9BETC

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