SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for P09595 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  P09595
Domain Number 1 Region: 119-217
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 1.46e-35
Family Ribosomal protein S3 C-terminal domain 0.0000503
Further Details:      
 
Domain Number 2 Region: 2-112
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 6.1e-30
Family Prokaryotic type KH domain (KH-domain type II) 0.00056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) P09595
Sequence length 218
Comment (sp|P09595|RR3_SPIOL) Chloroplastic small ribosomal subunit protein uS3c {ECO:0000303|PubMed:28007896} KW=Complete proteome; Reference proteome OX=3562 OS=Spinacia oleracea (Spinach). GN=rps3; OC=Anserineae; Spinacia.
Sequence
MGQKINPLGFRLGTTQSHYSLWFSQPKNYAEGLQEDQKIRDCIKNYVQKNTKTSSGVEGI
ARIEIQKRIDLIQVIIHMGFPKLLIENRPQGVEDLKINVQKELNCVNRKLNIAITRIAKP
YGDPNILAEFIAGQLKSRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR
EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFMGEE
Download sequence
Identical sequences P09595
4v61_AC 5mmj_c 5mmm_c 5x8p_c 5x8r_c

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]