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Domain assignment for Q4VIE8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Q4VIE8
Domain Number 1 Region: 341-512
Classification Level Classification E-value
Superfamily SARS receptor-binding domain-like 9.94e-63
Family SARS receptor-binding domain-like 0.001
Further Details:      
 
Domain Number 2 Region: 1001-1115
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 3.66e-41
Family Coronavirus S2 glycoprotein 0.00012
Further Details:      
 
Domain Number 3 Region: 1198-1293
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 1.66e-24
Family Coronavirus S2 glycoprotein 0.0015
Further Details:      
 
Weak hits

Sequence:  Q4VIE8
Domain Number - Region: 707-771,836-934,964-1079
Classification Level Classification E-value
Superfamily Phase 1 flagellin 0.0034
Family Phase 1 flagellin 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Q4VIE8
Sequence length 1361
Comment (tr|Q4VIE8|Q4VIE8_CVHOC) Spike glycoprotein {ECO:0000313|EMBL:AAX84795.1} OX=31631 OS=Human coronavirus OC43 (HCoV-OC43). GN=S OC=Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus. OH=9606
Sequence
MFLILLISLPTAFAVIGDLNCPLDTRLKGSFNNRDTGPPSISTDTVDVTNGLGTYYVLDR
VYLNTTLFLNGYYPTSGSTYRNMALKGTDKLSTLWFKPPFLSDFINGIFAKVKNTKVFKD
GVMYSEFPAITIGSTFVNTSYSVVVQPRTINSTQDGVNKLQGLLEVSVCQYNMCEYPHTI
CHPKLGNHFKELWHLDTGVVSCLYKRNFTYDVNATYLYFHFYQEGGTFYAYFTDTGFVTK
FLFNVYLGMALSHYYVMPLTCISRLDIGFTLEYWVTPLTSRQYLLAFNQDGIIFNAVDCM
SDFMSEIKCKTQSIAPPTGVYELNGYTVQPIADVYRRKPDLPNCNIEAWLNDKSVPSPLN
WERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNRRKVDLQL
GNLGYLQSSNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFVPQPTGV
FTNHSVVYAQHCFKAPKNFCPCKLNGSCPGKNNGIGTCPAGTNYLTCDNLCTLDPITFKA
PGTYKCPQTKSLVGIGEHCSGLAVKSDYCGNNSCTCQPQAFLGWSADSCLQGDKCNIFAN
FILHDVNNGLTCSTDLQKANTEIELGVCVNYDLYGISGQGIFFEVNATYYNSWQNLLYDS
NGNLYGFRDYITNRTFMIRSCYSGRVSAAYHANSSEPALLFRNIKCNYVFNNSLTRQLQP
INYSFDSYLGCVVNAYNSTAISVQTCDLTVGSGYCVDYSKNRRSRRAITTGYRFTNFEPF
TVNSVNDSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKLQLV
EYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGC
LGSECSKASSRSAIEDLLFDKVKLSDVGFVEAYNNCTGGAEIRDLICVQSYKGIKVLPPL
LSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRINGLGVTMDVLSQNQKLIANAFN
NALHAIQQGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALE
AEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNH
IISLVQNAPYGLYFIHFNYVPTKYVTAKVSPGLCIAGNRGIAPKSGYFVNVNNTWMYTGS
GYYYPEPITENNVVVMSTCAVNYTKAPYVMLNTSIPNLPDFKEELDQWFKNQTSVAPDLS
LDYINVTFLDLQVEMNRLQEAIKVLNHSYINLKDIGTYEYYVKWPWYVWLLICLAGVAML
VLLFFICCCTGCGTSCFKKCGGCCDDYTGYQELVIKTSHDD
Download sequence
Identical sequences Q4VIE8
Q4VIE8_CVHOC

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