SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for R7TLZ7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  R7TLZ7
Domain Number - Region: 80-111
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0693
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0094
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) R7TLZ7
Sequence length 205
Comment (tr|R7TLZ7|R7TLZ7_CAPTE) Uncharacterized protein {ECO:0000313|EMBL:ELT94823.1, ECO:0000313|EnsemblMetazoa:CapteP129713} OX=283909 OS=Capitella teleta (Polychaete worm). GN=CAPTEDRAFT_129713 OC=Capitellida; Capitellidae; Capitella.
Sequence
QVKNSHHLEPEGLRRCLQDVIAKKVKIGTLATDQHLMVGKMMREDFSKIDHQFDAWHCSK
NLTKKLTAKANTKGCEALMQWIRAISNHLWYSASTCKKNAQLLKEKWLSVLHHVAGVHSW
SGGQKFKKCDHGPMSDAPPGMEVAYLKRTSPAFKALKDVVSATALLKLLPKLTKFCHTGT
LEVFHSFLLRFCSKRQYFPYPGNLQ
Download sequence
Identical sequences R7TLZ7
jgi|Capca1|129713|e_gw1.5704.1.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]