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Domain assignment for S4WHJ6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  S4WHJ6
Domain Number 1 Region: 328-492
Classification Level Classification E-value
Superfamily SARS receptor-binding domain-like 3.27e-64
Family SARS receptor-binding domain-like 0.00091
Further Details:      
 
Domain Number 2 Region: 1003-1117
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 8.37e-42
Family Coronavirus S2 glycoprotein 0.0001
Further Details:      
 
Domain Number 3 Region: 1200-1295
Classification Level Classification E-value
Superfamily Coronavirus S2 glycoprotein 3.49e-25
Family Coronavirus S2 glycoprotein 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) S4WHJ6
Sequence length 1363
Comment (tr|S4WHJ6|S4WHJ6_9BETC) Spike glycoprotein {ECO:0000313|EMBL:AGO98885.1} OX=11128 OS=Bovine coronavirus. GN=S OC=Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus.
Sequence
MFLILLISLPTTFAVIGDLKCTTVSINDVDTGVPFISTDTVDVTNGLGTYYVLDRVYLNT
TLLLNGYYPTSGSTYRNMALKGTLLLSTLWFKPPFLSDFTNGIFAKVKNTKVIKNGVMYS
EFPAITIGSTFVNTSYSVVVQPHTTNFDNKIQGLLEVSVCQYTMCEYPNTICNPNLGNQR
VELWHWDTGVVSCLYKRNFTYDVNADYLYFHFYQEGGTFYAYFTDTGVVTKFLFNVYLGT
VLSHYYVMPLTCNSALKLEYWVTPLTSKQYLLAFNQDGVIFNAVDCKSDFMSEIKCKTLS
IAPSTGVYELNGYTVQPIADVYRRIPNLPDCNIEAWLNDKSVPSPLNWERKTFSNCNFNM
SSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRI
DTTATSCQLYYNLPAANVSVSRFNPSTWNRRFGFTEQSVFKPQPVGVFTDHDVVYAQHCF
KTPTNFCPCKLDGSLCVGNGSGIDAGYKNSGIGTCPAGTNYITCYNAAQCDCLCTPDPIT
SKATGPYKCPQTKYLVGIGEHCSGLAIKSDHCGGNPCTCQPQAFLGWSVEFCLQGDRCNI
FANFILHGVNSGTTCSTDLQKSNTDIILGVCVNYDLYGITGQGIFVEVNATYYNSWQNLL
YDSNGNLYGFRDYLTNRTFMIRSCYSGRVSAAFHANSSEPALLFRNIKCNYVFNNTLSRQ
LQPINYFDSYLGCVVNADNSTSSVVQTCDLTVGSGYCVDYSTKRRSRRAITTGYRFTNFE
PFTVNSVNDSLEPVGGLYEIQIPSEFTIGNMEEFIQTSSPKVTIDCSAFVCGDYAACKSQ
LVEYGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVL
GCLGSDCNRVSSRSAIEDLLFSKVKLADVGFVEAYNNCTGGAEIRDLICVQSYNGIKVLP
PLLSENQISGYTLAATSASLFPPWSAAAGVPFYLNVQYRINGIGVTMDVLSQNQKLIANA
FNNALGAIQEGFDSTNSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDA
LEAQAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNG
NHIISLVQNAPYGLYFIHFSYVPTKYVTAKVSPGLCIAGDRGIAPKSGYFVNVNNTWMFT
GSGYYYPEPITGNNVVVMSTCAVNYTKAPDVMLNISIPNLPDFKEELDQWFKNQTSVAPN
LSLDYINVTFLDLQDEMNRLQEAIKVLNQSYINLKDIGTYEYYVKWPWYVWLLIGFAGVA
MLVLLFFICCCTGCGTSCFKKCGGCCDDYTGHQELVIKTSHDD
Download sequence
Identical sequences S4WHJ6

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