SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for U3JMC7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  U3JMC7
Domain Number 1 Region: 285-341
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.57e-20
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 2 Region: 329-383
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000258
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Weak hits

Sequence:  U3JMC7
Domain Number - Region: 243-266
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0109
Family Classic zinc finger, C2H2 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) U3JMC7
Sequence length 445
Comment (tr|U3JMC7|U3JMC7_FICAL) Zic family member 3 {ECO:0000313|Ensembl:ENSFALP00000003931} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=ZIC3 OC=Ficedula.
Sequence
FPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTP
QAPGYASALGHHHHHHHHHAGQAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLH
GPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTD
PYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSR
PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHT
GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT
SDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSAGTKDSTK
TPPAALQSNPGHNPGLPPNFNEWYV
Download sequence
Identical sequences U3JMC7
ENSFALP00000003931

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]