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Domain assignment for U3JSW1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  U3JSW1
Domain Number 1 Region: 296-367
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.99e-17
Family PCI domain (PINT motif) 0.0000322
Further Details:      
 
Weak hits

Sequence:  U3JSW1
Domain Number - Region: 133-218
Classification Level Classification E-value
Superfamily TPR-like 0.0114
Family Tetratricopeptide repeat (TPR) 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) U3JSW1
Sequence length 408
Comment (tr|U3JSW1|U3JSW1_FICAL) COP9 signalosome subunit 4 {ECO:0000313|Ensembl:ENSFALP00000005865} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=COPS4 OC=Ficedula.
Sequence
PPPPPAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGVEQLEALKAFVEAMVNENVS
LVISRQLLTDFCTHLPSLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEE
DWRNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNES
TNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKSIVHETERLEALKHALHCTILASA
GQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTSDGSS
ILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGI
VHFETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEAQMAQ
Download sequence
Identical sequences U3JSW1
ENSFALP00000005865

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