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Domain assignment for U3K259 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  U3K259
Domain Number 1 Region: 160-395
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.52e-68
Family Tandem AAA-ATPase domain 0.0000401
Further Details:      
 
Domain Number 2 Region: 335-562
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.16e-53
Family Tandem AAA-ATPase domain 0.00061
Further Details:      
 
Weak hits

Sequence:  U3K259
Domain Number - Region: 574-599
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00011
Family Retrovirus zinc finger-like domains 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) U3K259
Sequence length 618
Comment (tr|U3K259|U3K259_FICAL) DEAD-box helicase 41 {ECO:0000313|Ensembl:ENSFALP00000009113} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=DDX41 OC=Ficedula.
Sequence
LRSHPVSPQRQREEPADTSDLSGEDDDDYVPYVPVKQRKQQMLQKLLQMRRKVVSEEEQR
DSGSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGR
ALMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFK
EMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCL
EQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVK
EQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSY
FKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYL
LECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKD
VLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESV
LMDLKALLLEAKQKVPPVLQVLHCGDETMLDIGGERGCAFCGGLGHRITDCPKLEAMQTK
QVSNIGRKDYLAHSSMDF
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Identical sequences U3K259
ENSFALP00000009113

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