SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for U3KKU4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  U3KKU4
Domain Number 1 Region: 187-652
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.67e-59
Family Hermes transposase-like 0.0005
Further Details:      
 
Domain Number 2 Region: 23-80
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000119
Family BED zinc finger 0.0000622
Further Details:      
 
Domain Number 3 Region: 121-178
Classification Level Classification E-value
Superfamily Hermes dimerisation domain 0.00000017
Family Hermes dimerisation domain 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) U3KKU4
Sequence length 695
Comment (tr|U3KKU4|U3KKU4_FICAL) Zinc finger BED-type containing 1 {ECO:0000313|Ensembl:ENSFALP00000015648} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=ZBED1 OC=Ficedula.
Sequence
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPGNCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCNLLTRCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRTEEKFFAVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNINNNFFNIRDSGFV
Download sequence
Identical sequences U3KKU4
XP_005037702.1.66865 XP_005037703.1.66865 XP_005037704.1.66865 ENSFALP00000015648

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]