SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for V2QIU2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  V2QIU2
Domain Number - Region: 41-90
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0127
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) V2QIU2
Sequence length 127
Comment (tr|V2QIU2|V2QIU2_9BACT) Uncharacterized protein {ECO:0000313|EMBL:ESJ99209.1} KW=Complete proteome; Reference proteome OX=1379858 OS=Mucispirillum schaedleri ASF457. GN=N508_00240 OC=Mucispirillum.
Sequence
MDKSEGKDWFAKTLNNVTEETAKVYKISRLKLEINSFNKTYNEKMHKISKRLLKLIEQGE
IDASLFEPEYSSIMQISEKIEEMEAEVEAIKGNLKYGFGKKKSDDNENIVDVKPETVEND
EKKEDNK
Download sequence
Identical sequences V2QIU2
WP_023275084.1.19485 WP_023275084.1.6205

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]