SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for PPA14672 from Pristionchus pacificus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  PPA14672
Domain Number 1 Region: 94-118
Classification Level Classification E-value
Superfamily Ribosomal proteins L15p and L18e 0.000000366
Family Ribosomal proteins L15p and L18e 0.0081
Further Details:      
 
Weak hits

Sequence:  PPA14672
Domain Number - Region: 12-42
Classification Level Classification E-value
Superfamily ISY1 domain-like 0.00628
Family ISY1 N-terminal domain-like 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) GBrowse: PPA14672   Protein: PP03432   Gene: WBGene00104226
Sequence length 153
Comment PP03432 WBGene00104226 status:Predicted
Sequence
MKNSQEEEEEGPVAKRPHDTKDCANLSDAERFRREIAKHLTTRDLHCSSRILNKTSTIEE
QACVYASLVLQDDDFERSFFAHSIQTSAIRQLLVIVKAKFFSHSAEQKIKAAGGTCVLVA
KGTINCVYDMNIDYYGSSIMPCVPSMLCHLSID
Download sequence
Identical sequences H3EXW2
PPA14672

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]