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P40 nucleoprotein family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1n93X   1.83e-160   0.00000000000341   33-374   1n93 X:  

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View all assignments containing a P40 nucleoprotein domain in each group of genomes.

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Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   546 546
No Yes Homo sapiens 76_38 Human 2 2
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 2 2
No Yes Homo sapiens (NCBI version) Human 2 2
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes NCBI 2017_08 genome   57 57
No Yes STRING v9.0.5 (STRING)   2 2
No Yes Uniprot 2018_03 genome   310 310
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   148 148

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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