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  Home > Genomes > PDB chains (SCOP 1.75) > Aclacinomycin methylesterase RdmC domains


Aclacinomycin methylesterase RdmC family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1q0rA   4.14e-57   0.000000000096   3-292   1q0r A:  

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View all assignments containing a Aclacinomycin methylesterase RdmC domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1712 1712
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium radiobacter K84   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Desulfovibrio desulfuricans ND132   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes NCBI 2017_08 genome   1048 1048
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   15 15
No Yes Uniprot 2018_03 genome   549 549
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   13 13
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   1 1

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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