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Avirulence protein AvrPto family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1r5eA   1.9e-71   0.000000813   2-106   1r5e A:  
2qkwA   6.22e-71   0.000000813   29-133   1r5e A:  

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View all assignments containing a Avirulence protein AvrPto domain in each group of genomes.

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Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   101 101
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes NCBI 2017_08 genome   61 61
No Yes STRING v9.0.5 (STRING)   2 2
No Yes Uniprot 2018_03 genome   24 24
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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