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GGDEF domain family domain assignments
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PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1w25A   8.34e-48   0.0000000585   293-449   1w25 A:294-455  

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Select to display   Genome       Domains   Proteins
No Yes ALL   335596 335596
No Yes Capitella sp. I   3 3
No Yes Rhodnius prolixus 22   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Physcomitrella patens   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Phytophthora capsici   3 3
No Yes Thermobaculum terrenum ATCC BAA-798   2 2
No Yes Leptolyngbya sp. PCC 7376   7 7
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   11 11
No Yes Synechocystis sp. PCC 6803   6 6
No Yes Thermosynechococcus sp. NK55   2 2
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   4 4
No Yes Synechococcus sp. PCC 6312   5 5
No Yes Synechococcus elongatus PCC 7942   7 7
No Yes Microcoleus sp. PCC 7113   5 5
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   11 11
No Yes Cyanothece sp. PCC 8802   7 7
No Yes Gloeocapsa sp. PCC 7428   6 6
No Yes Halothece sp. PCC 7418   3 3
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   3 3
No Yes Anabaena variabilis ATCC 29413   4 4
No Yes 'Nostoc azollae' 0708   2 2
No Yes Nostoc sp. PCC 7107   5 5
No Yes Nostoc punctiforme PCC 73102   6 6
No Yes Nostoc sp. PCC 7120   4 4
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   3 3
No Yes Conexibacter woesei DSM 14684   3 3
No Yes Rubrobacter xylanophilus DSM 9941   2 2
No Yes Ilumatobacter coccineus   3 3
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Acidothermus cellulolyticus 11B   3 3
No Yes Modestobacter marinus   6 6
No Yes Blastococcus saxobsidens DD2   5 5
No Yes Geodermatophilus obscurus DSM 43160   6 6
No Yes Kineococcus radiotolerans SRS30216   11 11
No Yes Catenulispora acidiphila DSM 44928   3 3
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia symbiont of Datisca glomerata   4 4
No Yes Frankia sp. EAN1pec   7 7
No Yes Frankia alni ACN14a   2 2
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Actinosynnema mirum DSM 43827   3 3
No Yes Saccharomonospora viridis DSM 43017   2 2
No Yes Pseudonocardia dioxanivorans CB1190   3 3
No Yes Saccharopolyspora erythraea NRRL 2338   4 4
No Yes Amycolatopsis mediterranei U32   8 8
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   13 13
No Yes Actinoplanes sp. SE50/110   22 22
No Yes Actinoplanes missouriensis 431   14 14
No Yes Rhodococcus jostii RHA1   3 3
No Yes Rhodococcus opacus B4   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   3 3
No Yes [Cellvibrio] gilvus ATCC 13127   2 2
No Yes Arthrobacter sp. FB24   1 1
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   2 2
No Yes Anaerolinea thermophila UNI-1   6 6
No Yes Thermomicrobium roseum DSM 5159   2 2
No Yes Sphaerobacter thermophilus DSM 20745   4 4
No Yes Herpetosiphon aurantiacus DSM 785   5 5
No Yes Roseiflexus sp. RS-1   7 7
No Yes Roseiflexus castenholzii DSM 13941   7 7
No Yes Chloroflexus sp. MS-G   5 5
No Yes Chloroflexus sp. Y-400-fl   9 9
No Yes Chloroflexus aggregans DSM 9485   9 9
No Yes Chloroflexus aurantiacus J-10-fl   9 9
No Yes Truepera radiovictrix DSM 17093   3 3
No Yes Deinococcus gobiensis I-0   3 3
No Yes Deinococcus deserti VCD115   7 7
No Yes Deinococcus maricopensis DSM 21211   17 17
No Yes Deinococcus geothermalis DSM 11300   4 4
No Yes Deinococcus proteolyticus MRP   5 5
No Yes Deinococcus radiodurans R1   1 1
No Yes Oceanithermus profundus DSM 14977   2 2
No Yes Marinithermus hydrothermalis DSM 14884   1 1
No Yes Meiothermus silvanus DSM 9946   5 5
No Yes Meiothermus ruber DSM 1279   3 3
No Yes Thermus sp. CCB_US3_UF1   2 2
No Yes Thermus scotoductus SA-01   2 2
No Yes Thermus thermophilus HB27   3 3
No Yes Selenomonas sputigena ATCC 35185   2 2
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   4 4
No Yes Natranaerobius thermophilus JW/NM-WN-LF   2 2
No Yes Symbiobacterium thermophilum IAM 14863   3 3
No Yes Clostridium clariflavum DSM 19732   7 7
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   6 6
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Thermaerobacter marianensis DSM 12885   2 2
No Yes Sulfobacillus acidophilus DSM 10332   2 2
No Yes Oscillibacter valericigenes Sjm18-20   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   4 4
No Yes Thermincola potens JR   9 9
No Yes Pelotomaculum thermopropionicum SI   2 2
No Yes Desulfosporosinus acidiphilus SJ4   8 8
No Yes Desulfosporosinus orientis DSM 765   4 4
No Yes Dehalobacter sp. DCA   6 6
No Yes Dehalobacter sp. CF   6 6
No Yes Syntrophobotulus glycolicus DSM 8271   5 5
No Yes Desulfitobacterium hafniense Y51   4 4
No Yes Desulfitobacterium dehalogenans ATCC 51507   3 3
No Yes Desulfotomaculum reducens MI-1   6 6
No Yes Desulfotomaculum acetoxidans DSM 771   7 7
No Yes Desulfotomaculum kuznetsovii DSM 6115   9 9
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   3 3
No Yes Desulfotomaculum ruminis DSM 2154   10 10
No Yes Acetobacterium woodii DSM 1030   15 15
No Yes Eubacterium limosum KIST612   1 1
No Yes Clostridium sticklandii DSM 519   6 6
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Coprococcus sp. ART55/1   1 1
No Yes Butyrivibrio proteoclasticus B316   2 2
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   3 3
No Yes Heliobacterium modesticaldum Ice1   3 3
No Yes Alkaliphilus oremlandii OhILAs   4 4
No Yes Alkaliphilus metalliredigens QYMF   3 3
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   5 5
No Yes Clostridium kluyveri DSM 555   2 2
No Yes Clostridium beijerinckii NCIMB 8052   5 5
No Yes Clostridium tetani E88   2 2
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium cellulovorans 743B   1 1
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium acetobutylicum ATCC 824   3 3
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   2 2
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   5 5
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Thermodesulfobium narugense DSM 14796   3 3
No Yes Coprothermobacter proteolyticus DSM 5265   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   2 2
No Yes Thermoanaerobacter tengcongensis MB4   3 3
No Yes Carboxydothermus hydrogenoformans Z-2901   5 5
No Yes Moorella thermoacetica ATCC 39073   2 2
No Yes Ammonifex degensii KC4   3 3
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   2 2
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   2 2
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   3 3
No Yes Thermoanaerobacter wiegelii Rt8.B1   3 3
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   2 2
No Yes Acetohalobium arabaticum DSM 5501   2 2
No Yes Halothermothrix orenii H 168   4 4
No Yes Halanaerobium hydrogeniformans   2 2
No Yes Halanaerobium praevalens DSM 2228   3 3
No Yes Exiguobacterium sp. MH3   9 9
No Yes Exiguobacterium sp. AT1b   8 8
No Yes Exiguobacterium sibiricum 255-15   4 4
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   5 5
No Yes Paenibacillus sp. JDR-2   5 5
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Paenibacillus mucilaginosus 3016   11 11
No Yes Paenibacillus polymyxa M1   4 4
No Yes Bacillus selenitireducens MLS10   8 8
No Yes Listeria welshimeri serovar 6b str. SLCC5334   2 2
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   2 2
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   2 2
No Yes Solibacillus silvestris StLB046   2 2
No Yes Geobacillus thermoglucosidasius C56-YS93   2 2
No Yes Lysinibacillus sphaericus C3-41   4 4
No Yes Anoxybacillus flavithermus WK1   3 3
No Yes Geobacillus kaustophilus HTA426   1 1
No Yes Geobacillus sp. GHH01   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Geobacillus thermodenitrificans NG80-2   2 2
No Yes Halobacillus halophilus DSM 2266   2 2
No Yes Bacillus sp. JS   1 1
No Yes Bacillus sp. 1NLA3E   3 3
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   2 2
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus halodurans C-125   2 2
No Yes Bacillus weihenstephanensis KBAB4   3 3
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   3 3
No Yes Bacillus anthracis str. A0248   3 3
No Yes Bacillus pseudofirmus OF4   3 3
No Yes Bacillus cellulosilyticus DSM 2522   3 3
No Yes Bacillus pumilus SAFR-032   2 2
No Yes Bacillus coagulans 2-6   2 2
No Yes Macrococcus caseolyticus JCSC5402   1 1
No Yes Candidatus Cloacamonas acidaminovorans   2 2
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Chlorobium limicola DSM 245   1 1
No Yes Chlorobaculum parvum NCIB 8327   1 1
No Yes Chlorobium tepidum TLS   1 1
No Yes Chloroherpeton thalassium ATCC 35110   5 5
No Yes Prosthecochloris aestuarii DSM 271   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 3
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Isosphaera pallida ATCC 43644   2 2
No Yes Planctomyces brasiliensis DSM 5305   3 3
No Yes Planctomyces limnophilus DSM 3776   3 3
No Yes Rhodopirellula baltica SH 1   4 4
No Yes Pirellula staleyi DSM 6068   3 3
No Yes Opitutus terrae PB90-1   1 1
No Yes Thermovirga lienii DSM 17291   5 5
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Thermanaerovibrio acidaminovorans DSM 6589   3 3
No Yes Anaerobaculum mobile DSM 13181   1 1
No Yes Turneriella parva DSM 21527   7 7
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   3 3
No Yes Leptospira interrogans serovar Lai str. IPAV   10 10
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   5 5
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira pilosicoli 95/1000   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Spirochaeta smaragdinae DSM 11293   7 7
No Yes Sphaerochaeta pleomorpha str. Grapes   4 4
No Yes Sphaerochaeta globus str. Buddy   3 3
No Yes Spirochaeta caldaria DSM 7334   5 5
No Yes Treponema azotonutricium ZAS-9   4 4
No Yes Treponema primitia ZAS-2   3 3
No Yes Treponema brennaborense DSM 12168   2 2
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   4 4
No Yes Spirochaeta africana DSM 8902   8 8
No Yes Spirochaeta thermophila DSM 6192   5 5
No Yes Thermodesulfatator indicus DSM 15286   3 3
No Yes Thermodesulfobacterium sp. OPB45   5 5
No Yes Desulfurispirillum indicum S5   9 9
No Yes Calditerrivibrio nitroreducens DSM 19672   5 5
No Yes Denitrovibrio acetiphilus DSM 12809   14 14
No Yes Deferribacter desulfuricans SSM1   10 10
No Yes Flexistipes sinusarabici DSM 4947   5 5
No Yes Marinitoga piezophila KA3   3 3
No Yes Mesotoga prima MesG1.Ag.4.2   5 5
No Yes Kosmotoga olearia TBF 19.5.1   4 4
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Fervidobacterium nodosum Rt17-B1   4 4
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermosipho africanus TCF52B   3 3
No Yes Thermotoga lettingae TMO   3 3
No Yes Thermotoga thermarum DSM 5069   1 1
No Yes Thermotoga sp. RQ2   3 3
No Yes Thermotoga naphthophila RKU-10   3 3
No Yes Thermotoga petrophila RKU-1   2 2
No Yes Thermotoga neapolitana DSM 4359   2 2
No Yes Thermotoga maritima MSB8   3 3
No Yes Thermovibrio ammonificans HB-1   3 3
No Yes Desulfurobacterium thermolithotrophum DSM 11699   3 3
No Yes Sulfurihydrogenibium sp. YO3AOP1   5 5
No Yes Sulfurihydrogenibium azorense Az-Fu1   6 6
No Yes Persephonella marina EX-H1   12 12
No Yes Hydrogenobaculum sp. SN   6 6
No Yes Hydrogenobaculum sp. HO   6 6
No Yes Hydrogenobaculum sp. Y04AAS1   8 8
No Yes Thermocrinis albus DSM 14484   3 3
No Yes Aquifex aeolicus VF5   4 4
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Dictyoglomus turgidum DSM 6724   3 3
No Yes Dictyoglomus thermophilum H-6-12   4 4
No Yes Caldisericum exile AZM16c01   2 2
No Yes Candidatus Chloracidobacterium thermophilum B   5 5
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   9 9
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   6 6
No Yes Terriglobus saanensis SP1PR4   13 13
No Yes Terriglobus roseus DSM 18391   9 9
No Yes Acidobacterium capsulatum ATCC 51196   7 7
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Candidatus Nitrospira defluvii   2 2
No Yes Leptospirillum ferrooxidans C2-3   8 8
No Yes Ilyobacter polytropus DSM 2926   5 5
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   4 4
No Yes Nautilia profundicola AmH   10 10
No Yes Nitratifractor salsuginis DSM 16511   1 1
No Yes Sulfurospirillum deleyianum DSM 6946   7 7
No Yes Sulfurospirillum barnesii SES-3   7 7
No Yes Arcobacter sp. L   13 13
No Yes Arcobacter nitrofigilis DSM 7299   13 13
No Yes Arcobacter butzleri RM4018   5 5
No Yes Campylobacter curvus 525.92   2 2
No Yes Campylobacter concisus 13826   2 2
No Yes Campylobacter sp. 03-427   1 1
No Yes Campylobacter fetus subsp. fetus 82-40   2 2
No Yes uncultured Sulfuricurvum sp. RIFRC-1   14 14
No Yes Sulfuricurvum kujiense DSM 16994   29 29
No Yes Sulfurimonas autotrophica DSM 16294   19 19
No Yes Sulfurimonas denitrificans DSM 1251   15 15
No Yes Wolinella succinogenes DSM 1740   6 6
No Yes Nitratiruptor sp. SB155-2   9 9
No Yes Sulfurovum sp. NBC37-1   3 3
No Yes Desulfarculus baarsii DSM 2075   10 10
No Yes Desulfobacca acetoxidans DSM 11109   2 2
No Yes Syntrophus aciditrophicus SB   4 4
No Yes Desulfomonile tiedjei DSM 6799   5 5
No Yes Syntrophobacter fumaroxidans MPOB   2 2
No Yes Desulfurivibrio alkaliphilus AHT2   11 11
No Yes Desulfotalea psychrophila LSv54   14 14
No Yes Desulfobulbus propionicus DSM 2032   10 10
No Yes Desulfatibacillum alkenivorans AK-01   13 13
No Yes Desulfobacterium autotrophicum HRM2   16 16
No Yes Desulfococcus oleovorans Hxd3   13 13
No Yes Desulfohalobium retbaense DSM 5692   12 12
No Yes Desulfomicrobium baculatum DSM 4028   11 11
No Yes Desulfovibrio piezophilus   11 11
No Yes Desulfovibrio aespoeensis Aspo-2   8 8
No Yes Desulfovibrio magneticus RS-1   22 22
No Yes Desulfovibrio alaskensis G20   13 13
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4   11 11
No Yes Desulfovibrio salexigens DSM 2638   19 19
No Yes Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774   4 4
No Yes Desulfovibrio africanus str. Walvis Bay   4 4
No Yes Hippea maritima DSM 10411   6 6
No Yes Geobacter daltonii FRC-32   9 9
No Yes Geobacter sp. M21   8 8
No Yes Geobacter uraniireducens Rf4   8 8
No Yes Geobacter lovleyi SZ   21 21
No Yes Geobacter bemidjiensis Bem   9 9
No Yes Geobacter sulfurreducens KN400   14 14
No Yes Geobacter metallireducens GS-15   9 9
No Yes Pelobacter propionicus DSM 2379   11 11
No Yes Pelobacter carbinolicus DSM 2380   17 17
No Yes Haliangium ochraceum DSM 14365   6 6
No Yes Sorangium cellulosum 'So ce 56'   5 5
No Yes Anaeromyxobacter sp. Fw109-5   5 5
No Yes Anaeromyxobacter dehalogenans 2CP-1   4 4
No Yes Stigmatella aurantiaca DW4/3-1   8 8
No Yes Corallococcus coralloides DSM 2259   7 7
No Yes Myxococcus xanthus DK 1622   7 7
No Yes Myxococcus fulvus HW-1   7 7
No Yes Dechloromonas aromatica RCB   22 22
No Yes Thauera sp. MZ1T   9 9
No Yes Azoarcus sp. KH32C   29 29
No Yes Azoarcus sp. BH72   15 15
No Yes Aromatoleum aromaticum EbN1   5 5
No Yes Dechlorosoma suillum PS   17 17
No Yes Pseudogulbenkiania sp. NH8B   14 14
No Yes Laribacter hongkongensis HLHK9   7 7
No Yes Chromobacterium violaceum ATCC 12472   20 20
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   11 11
No Yes beta proteobacterium CB   3 3
No Yes Methylibium petroleiphilum PM1   9 9
No Yes Thiomonas arsenitoxydans   11 11
No Yes Thiomonas intermedia K12   8 8
No Yes Rubrivivax gelatinosus IL144   12 12
No Yes Leptothrix cholodnii SP-6   10 10
No Yes Burkholderia phytofirmans PsJN   10 10
No Yes Burkholderia phymatum STM815   10 10
No Yes Burkholderia xenovorans LB400   11 11
No Yes Ralstonia eutropha JMP134   8 8
No Yes Cupriavidus taiwanensis LMG 19424   5 5
No Yes Cupriavidus metallidurans CH34   8 8
No Yes Cupriavidus necator N-1   5 5
No Yes Ralstonia eutropha H16   8 8
No Yes Ralstonia pickettii 12D   7 7
No Yes Ralstonia solanacearum CFBP2957   8 8
No Yes Burkholderia sp. RPE64   7 7
No Yes Burkholderia sp. CCGE1002   10 10
No Yes Burkholderia thailandensis E264   5 5
No Yes Burkholderia pseudomallei 1106a   5 5
No Yes Burkholderia mallei SAVP1   4 4
No Yes Burkholderia ambifaria AMMD   10 10
No Yes Burkholderia cenocepacia HI2424   7 7
No Yes Burkholderia multivorans ATCC 17616   5 5
No Yes Burkholderia vietnamiensis G4   13 13
No Yes Burkholderia gladioli BSR3   5 5
No Yes Burkholderia glumae BGR1   6 6
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Alicycliphilus denitrificans K601   11 11
No Yes Delftia sp. Cs1-4   9 9
No Yes Delftia acidovorans SPH-1   8 8
No Yes Variovorax paradoxus S110   4 4
No Yes Rhodoferax ferrireducens T118   16 16
No Yes Acidovorax ebreus TPSY   9 9
No Yes Acidovorax sp. KKS102   17 17
No Yes Acidovorax sp. JS42   10 10
No Yes Acidovorax citrulli AAC00-1   9 9
No Yes Acidovorax avenae subsp. avenae ATCC 19860   12 12
No Yes Comamonas testosteroni CNB-2   18 18
No Yes Herminiimonas arsenicoxydans   15 15
No Yes Collimonas fungivorans Ter331   4 4
No Yes Janthinobacterium sp. Marseille   12 12
No Yes Herbaspirillum seropedicae SmR1   16 16
No Yes Bordetella avium 197N   7 7
No Yes Bordetella pertussis Tohama I   2 2
No Yes Bordetella parapertussis 12822   2 2
No Yes Bordetella bronchiseptica RB50   4 4
No Yes Achromobacter xylosoxidans A8   10 10
No Yes Achromobacter xylosoxidans   6 6
No Yes Thiobacillus denitrificans ATCC 25259   13 13
No Yes Nitrosospira multiformis ATCC 25196   5 5
No Yes Nitrosomonas sp. Is79A3   13 13
No Yes Nitrosomonas eutropha C91   3 3
No Yes Nitrosomonas europaea ATCC 19718   2 2
No Yes Sideroxydans lithotrophicus ES-1   19 19
No Yes Gallionella capsiferriformans ES-2   19 19
No Yes Methylotenera versatilis 301   11 11
No Yes Methylotenera mobilis JLW8   9 9
No Yes Methylovorus sp. MP688   8 8
No Yes Methylovorus glucosetrophus SIP3-4   7 7
No Yes Methylobacillus flagellatus KT   4 4
No Yes Magnetococcus marinus MC-1   17 17
No Yes Parvularcula bermudensis HTCC2503   2 2
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   2 2
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   2 2
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   3 3
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   3 3
No Yes Sphingobium chlorophenolicum L-1   3 3
No Yes Sphingomonas sp. MM-1   2 2
No Yes Sphingomonas wittichii RW1   6 6
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Maricaulis maris MCS10   4 4
No Yes Hirschia baltica ATCC 49814   2 2
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   3 3
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   3 3
No Yes Ruegeria pomeroyi DSS-3   3 3
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   3 3
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum photometricum DSM 122   13 13
No Yes Tistrella mobilis KA081020-065   7 7
No Yes Magnetospirillum magneticum AMB-1   20 20
No Yes Rhodospirillum centenum SW   7 7
No Yes Rhodospirillum rubrum F11   13 13
No Yes Azospirillum lipoferum 4B   17 17
No Yes Azospirillum sp. B510   15 15
No Yes Azospirillum brasilense Sp245   10 10
No Yes Gluconacetobacter diazotrophicus PAl 5   3 3
No Yes Acidiphilium multivorum AIU301   3 3
No Yes Acidiphilium cryptum JF-5   3 3
No Yes Polymorphum gilvum SL003B-26A1   7 7
No Yes Micavibrio aeruginosavorus ARL-13   2 2
No Yes Neorickettsia sennetsu str. Miyayama   1 1
No Yes Neorickettsia risticii str. Illinois   1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   1 1
No Yes Wolbachia sp. wRi   1 1
No Yes Ehrlichia chaffeensis str. Arkansas   1 1
No Yes Ehrlichia canis str. Jake   1 1
No Yes Ehrlichia ruminantium str. Gardel   1 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Orientia tsutsugamushi str. Boryong   1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Rickettsia canadensis str. McKiel   1 1
No Yes Rickettsia typhi str. Wilmington   1 1
No Yes Rickettsia prowazekii str. BuV67-CWPP   1 1
No Yes Rickettsia philipii str. 364D   1 1
No Yes Rickettsia heilongjiangensis 054   1 1
No Yes Rickettsia peacockii str. Rustic   1 1
No Yes Rickettsia felis URRWXCal2   1 1
No Yes Rickettsia slovaca 13-B   1 1
No Yes Rickettsia parkeri str. Portsmouth   1 1
No Yes Rickettsia massiliae MTU5   1 1
No Yes Rickettsia japonica YH   1 1
No Yes Rickettsia africae ESF-5   1 1
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   1 1
No Yes Rickettsia montanensis str. OSU 85-930   1 1
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   1 1
No Yes Rickettsia australis str. Cutlack   1 1
No Yes Rickettsia akari str. Hartford   1 1
No Yes Rickettsia conorii str. Malish 7   1 1
No Yes Starkeya novella DSM 506   5 5
No Yes Xanthobacter autotrophicus Py2   8 8
No Yes Azorhizobium caulinodans ORS 571   15 15
No Yes Methylobacterium chloromethanicum CM4   12 12
No Yes Methylobacterium extorquens AM1   9 9
No Yes Methylobacterium sp. 4-46   6 6
No Yes Methylobacterium populi BJ001   11 11
No Yes Methylobacterium nodulans ORS 2060   3 3
No Yes Methylobacterium radiotolerans JCM 2831   7 7
No Yes Parvibaculum lavamentivorans DS-1   2 2
No Yes Ochrobactrum anthropi ATCC 49188   6 6
No Yes Brucella microti CCM 4915   3 3
No Yes Brucella pinnipedialis B2/94   3 3
No Yes Brucella canis ATCC 23365   3 3
No Yes Brucella suis ATCC 23445   3 3
No Yes Brucella melitensis ATCC 23457   3 3
No Yes Brucella ovis ATCC 25840   2 2
No Yes Brucella abortus S19   2 2
No Yes Sinorhizobium fredii NGR234   7 7
No Yes Sinorhizobium medicae WSM419   2 2
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   4 4
No Yes Rhizobium etli CIAT 652   8 8
No Yes Rhizobium leguminosarum bv. viciae 3841   6 6
No Yes Agrobacterium tumefaciens str. C58   3 3
No Yes Agrobacterium radiobacter K84   4 4
No Yes Agrobacterium sp. H13-3   4 4
No Yes Agrobacterium vitis S4   5 5
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Mesorhizobium opportunistum WSM2075   5 5
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   5 5
No Yes Mesorhizobium loti MAFF303099   5 5
No Yes Methylocella silvestris BL2   3 3
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Pelagibacterium halotolerans B2   4 4
No Yes Hyphomicrobium sp. MC1   5 5
No Yes Hyphomicrobium denitrificans ATCC 51888   2 2
No Yes Oligotropha carboxidovorans OM4   9 9
No Yes Rhodopseudomonas palustris BisA53   10 10
No Yes Nitrobacter winogradskyi Nb-255   2 2
No Yes Nitrobacter hamburgensis X14   3 3
No Yes Bradyrhizobium japonicum USDA 110   13 13
No Yes Bradyrhizobium sp. ORS 278   9 9
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   19 19
No Yes Teredinibacter turnerae T7901   11 11
No Yes Cellvibrio japonicus Ueda107   13 13
No Yes Oceanimonas sp. GK1   8 8
No Yes Tolumonas auensis DSM 9187   6 6
No Yes Aeromonas veronii B565   11 11
No Yes Aeromonas salmonicida subsp. salmonicida A449   8 8
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   8 8
No Yes Aliivibrio salmonicida LFI1238   7 7
No Yes Vibrio fischeri MJ11   6 6
No Yes Vibrio sp. Ex25   8 8
No Yes Vibrio harveyi ATCC BAA-1116   5 5
No Yes Vibrio parahaemolyticus RIMD 2210633   7 7
No Yes Vibrio splendidus LGP32   4 4
No Yes Vibrio anguillarum 775   3 3
No Yes Vibrio furnissii NCTC 11218   8 8
No Yes Vibrio vulnificus MO6-24/O   13 13
No Yes Vibrio cholerae O395   7 7
No Yes Photobacterium profundum SS9   4 4
No Yes Psychromonas ingrahamii 37   9 9
No Yes Psychromonas sp. CNPT3   5 5
No Yes Idiomarina loihiensis L2TR   9 9
No Yes Ferrimonas balearica DSM 9799   9 9
No Yes Shewanella piezotolerans WP3   10 10
No Yes Shewanella loihica PV-4   10 10
No Yes Shewanella halifaxensis HAW-EB4   11 11
No Yes Shewanella sediminis HAW-EB3   22 22
No Yes Shewanella denitrificans OS217   12 12
No Yes Shewanella pealeana ATCC 700345   13 13
No Yes Shewanella oneidensis MR-1   9 9
No Yes Shewanella baltica OS185   13 13
No Yes Shewanella woodyi ATCC 51908   16 16
No Yes Shewanella sp. MR-4   16 16
No Yes Shewanella amazonensis SB2B   20 20
No Yes Shewanella violacea DSS12   8 8
No Yes Shewanella frigidimarina NCIMB 400   22 22
No Yes Shewanella putrefaciens CN-32   10 10
No Yes Colwellia psychrerythraea 34H   18 18
No Yes Pseudoalteromonas sp. SM9913   17 17
No Yes Pseudoalteromonas atlantica T6c   12 12
No Yes Pseudoalteromonas haloplanktis TAC125   9 9
No Yes Glaciecola sp. 4H-3-7+YE-5   18 18
No Yes Glaciecola nitratireducens FR1064   20 20
No Yes Marinobacter adhaerens HP15   27 27
No Yes Marinobacter sp. BSs20148   12 12
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   20 20
No Yes Marinobacter aquaeolei VT8   21 21
No Yes Alteromonas sp. SN2   12 12
No Yes Alteromonas macleodii str. 'Deep ecotype'   4 4
No Yes Kangiella koreensis DSM 16069   8 8
No Yes Hahella chejuensis KCTC 2396   21 21
No Yes Alcanivorax borkumensis SK2   5 5
No Yes Marinomonas posidonica IVIA-Po-181   10 10
No Yes Marinomonas sp. MWYL1   19 19
No Yes Marinomonas mediterranea MMB-1   14 14
No Yes Chromohalobacter salexigens DSM 3043   5 5
No Yes Halomonas elongata DSM 2581   2 2
No Yes Methylomicrobium alcaliphilum   17 17
No Yes Methylomonas methanica MC09   17 17
No Yes Methylococcus capsulatus str. Bath   5 5
No Yes Rhodanobacter denitrificans   8 8
No Yes Frateuria aurantia DSM 6220   3 3
No Yes Pseudoxanthomonas spadix BD-a59   3 3
No Yes Pseudoxanthomonas suwonensis 11-1   8 8
No Yes Stenotrophomonas maltophilia K279a   9 9
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   8 8
No Yes Xanthomonas albilineans GPE PC73   5 5
No Yes Xanthomonas oryzae pv. oryzae PXO99A   5 5
No Yes Xanthomonas campestris pv. campestris str. B100   8 8
No Yes Halothiobacillus neapolitanus c2   7 7
No Yes Spiribacter sp. UAH-SP71   5 5
No Yes Alkalilimnicola ehrlichii MLHE-1   17 17
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   16 16
No Yes Thioalkalivibrio sp. K90mix   16 16
No Yes Halorhodospira halophila SL1   5 5
No Yes Allochromatium vinosum DSM 180   10 10
No Yes Thiocystis violascens DSM 198   16 16
No Yes Nitrosococcus watsonii C-113   2 2
No Yes Nitrosococcus halophilus Nc4   3 3
No Yes Nitrosococcus oceani ATCC 19707   2 2
No Yes Legionella longbeachae NSW150   5 5
No Yes Legionella pneumophila str. Corby   5 5
No Yes gamma proteobacterium HdN1   13 13
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   6 6
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   5 5
No Yes Yersinia pseudotuberculosis IP 31758   2 2
No Yes Yersinia pestis Pestoides F   2 2
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   6 6
No Yes Serratia sp. AS12   5 5
No Yes Serratia sp. ATCC 39006   4 4
No Yes Serratia plymuthica AS9   5 5
No Yes Serratia proteamaculans 568   5 5
No Yes Dickeya dadantii Ech703   5 5
No Yes Dickeya zeae Ech1591   4 4
No Yes Pectobacterium wasabiae WPP163   7 7
No Yes Pectobacterium sp. SCC3193   7 7
No Yes Pectobacterium atrosepticum SCRI1043   6 6
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   7 7
No Yes Pantoea sp. At-9b   7 7
No Yes Pantoea vagans C9-1   5 5
No Yes Pantoea ananatis LMG 20103   5 5
No Yes Erwinia tasmaniensis Et1/99   4 4
No Yes Erwinia sp. Ejp617   3 3
No Yes Erwinia billingiae Eb661   5 5
No Yes Erwinia pyrifoliae Ep1/96   3 3
No Yes Erwinia amylovora ATCC 49946   3 3
No Yes Escherichia blattae DSM 4481   3 3
No Yes Cronobacter turicensis z3032   4 4
No Yes Cronobacter sakazakii ES15   5 5
No Yes Enterobacteriaceae bacterium strain FGI 57   3 3
No Yes Shigella sonnei Ss046   4 4
No Yes Shigella flexneri 5 str. 8401   2 2
No Yes Shigella dysenteriae Sd197   2 2
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   3 3
No Yes Klebsiella oxytoca E718   4 4
No Yes Klebsiella variicola At-22   7 7
No Yes Klebsiella pneumoniae NTUH-K2044   5 5
No Yes Enterobacter aerogenes KCTC 2190   4 4
No Yes Escherichia fergusonii ATCC 35469   5 5
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   5 5
No Yes Enterobacter sp. R4-368   9 9
No Yes Enterobacter sp. 638   5 5
No Yes Enterobacter asburiae LF7a   5 5
No Yes Enterobacter cloacae subsp. dissolvens SDM   4 4
No Yes Citrobacter rodentium ICC168   3 3
No Yes Citrobacter koseri ATCC BAA-895   3 3
No Yes Azotobacter vinelandii DJ   5 5
No Yes Pseudomonas sp. TKP   13 13
No Yes Pseudomonas sp. UW4   16 16
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   17 17
No Yes Pseudomonas entomophila L48   13 13
No Yes Pseudomonas syringae pv. tomato str. DC3000   11 11
No Yes Pseudomonas stutzeri A1501   13 13
No Yes Pseudomonas fulva 12-X   14 14
No Yes Pseudomonas putida F1   16 16
No Yes Pseudomonas protegens Pf-5   15 15
No Yes Pseudomonas fluorescens SBW25   13 13
No Yes Pseudomonas mendocina ymp   15 15
No Yes Pseudomonas aeruginosa UCBPP-PA14   15 15
No Yes Pseudomonas sp. VLB120   11 11
No Yes Acinetobacter oleivorans DR1   4 4
No Yes Acinetobacter calcoaceticus PHEA-2   5 5
No Yes Acinetobacter baumannii ATCC 17978   5 5
No Yes Acinetobacter sp. ADP1   2 2
No Yes Methylophaga sp. JAM1   15 15
No Yes Cycloclasticus sp. P1   7 7
No Yes Thiomicrospira crunogena XCL-2   12 12
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 3 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Chroococcidiopsis thermalis PCC 7203   4 4
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   6 6
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   6 6
No Yes Synechocystis sp. PCC 6803 substr. GT-I   6 6
No Yes Synechocystis sp. PCC 6803   6 6
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   2 2
No Yes Synechococcus sp. JA-3-3Ab   2 2
No Yes Synechococcus sp. PCC 7002   2 2
No Yes Synechococcus elongatus PCC 6301   7 7
No Yes Crinalium epipsammum PCC 9333   8 8
No Yes Oscillatoria nigro-viridis PCC 7112   6 6
No Yes Oscillatoria acuminata PCC 6304   10 10
No Yes Arthrospira platensis NIES-39   9 9
No Yes Cyanothece sp. PCC 7822   13 13
No Yes Cyanothece sp. PCC 7425   3 3
No Yes Cyanothece sp. PCC 7424   14 14
No Yes Cyanothece sp. ATCC 51142   6 6
No Yes Cyanothece sp. PCC 8801   8 8
No Yes Cyanobacterium aponinum PCC 10605   6 6
No Yes Cyanobacterium stanieri PCC 7202   4 4
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   2 2
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   4 4
No Yes Stanieria cyanosphaera PCC 7437   3 3
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   5 5
No Yes Anabaena cylindrica PCC 7122   8 8
No Yes Frankia sp. EuI1c   4 4
No Yes Frankia sp. CcI3   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Saccharothrix espanaensis DSM 44229   5 5
No Yes Amycolatopsis mediterranei RB   8 8
No Yes Amycolatopsis mediterranei S699   8 8
No Yes Amycolatopsis mediterranei S699   8 8
No Yes Amycolatopsis orientalis HCCB10007   5 5
No Yes Actinoplanes friuliensis DSM 7358   10 10
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Chthonomonas calidirosea T49   6 6
No Yes Deinococcus peraridilitoris DSM 19664   13 13
No Yes Thermus oshimai JL-2   3 3
No Yes Thermus thermophilus JL-18   2 2
No Yes Thermus thermophilus SG0.5JP17-16   3 3
No Yes Thermus thermophilus HB8   2 2
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   6 6
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   2 2
No Yes Sulfobacillus acidophilus TPY   2 2
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   6 6
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   2 2
No Yes Desulfitobacterium hafniense DCB-2   4 4
No Yes Clostridium saccharobutylicum DSM 13864   3 3
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   4 4
No Yes Clostridium kluyveri NBRC 12016   2 2
No Yes Clostridium tetani genome 12124569   2 2
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   2 2
No Yes Clostridium pasteurianum BC1   2 2
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum E3 str. Alaska E43   3 3
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Clostridium acetobutylicum DSM 1731   3 3
No Yes Clostridium acetobutylicum EA 2018   3 3
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 2
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Exiguobacterium antarcticum B7   3 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   4 4
No Yes Paenibacillus sp. Y412MC10   6 6
No Yes Paenibacillus mucilaginosus KNP414   12 12
No Yes Paenibacillus mucilaginosus K02   14 14
No Yes Paenibacillus larvae subsp. larvae DSM 25430   1 1
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   4 4
No Yes Paenibacillus polymyxa E681   3 3
No Yes Listeria monocytogenes EGD sequence   2 2
No Yes Listeria monocytogenes N53-1   2 2
No Yes Listeria monocytogenes La111   2 2
No Yes Listeria monocytogenes serotype 4b str. LL195   2 2
No Yes Listeria monocytogenes 07PF0776   2 2
No Yes Listeria monocytogenes M7   2 2
No Yes Listeria monocytogenes J1-220   2 2
No Yes Listeria monocytogenes J1816   2 2
No Yes Listeria monocytogenes SLCC2376   2 2
No Yes Listeria monocytogenes SLCC5850   2 2
No Yes Listeria monocytogenes ATCC 19117   2 2
No Yes Listeria monocytogenes L312   2 2
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC7179   2 2
No Yes Listeria monocytogenes SLCC2540   2 2
No Yes Listeria monocytogenes SLCC2378   2 2
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   2 2
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   2 2
No Yes Listeria monocytogenes 08-5578   2 2
No Yes Listeria monocytogenes 08-5923   2 2
No Yes Listeria monocytogenes L99   2 2
No Yes Listeria monocytogenes HCC23   2 2
No Yes Listeria monocytogenes 10403S   2 2
No Yes Listeria monocytogenes J0161   2 2
No Yes Listeria monocytogenes Finland 1998   2 2
No Yes Listeria monocytogenes FSL R2-561   2 2
No Yes Listeria monocytogenes serotype 4b str. F2365   2 2
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Geobacillus sp. C56-T3   2 2
No Yes Geobacillus sp. Y4.1MC1   2 2
No Yes Geobacillus sp. Y412MC52   3 3
No Yes Geobacillus sp. Y412MC61   3 3
No Yes Amphibacillus xylanus NBRC 15112   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   7 7
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   1 1
No Yes Bacillus thuringiensis HD-771   3 3
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   3 3
No Yes Bacillus thuringiensis YBT-1518   3 3
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   2 2
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   3 3
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   3 3
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   2 2
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   3 3
No Yes Bacillus cereus F837/76   2 2
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   3 3
No Yes Bacillus anthracis str. H9401   3 3
No Yes Bacillus anthracis str. CDC 684   3 3
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 3
No Yes Bacillus anthracis str. Sterne   3 3
No Yes Bacillus anthracis str. Ames   3 3
No Yes Bacillus coagulans 36D1   2 2
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 3
No Yes Singulisphaera acidiphila DSM 18658   8 8
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   3 3
No Yes Leptospira interrogans serovar Lai str. 56601   10 10
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   10 10
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   5 5
No Yes Brachyspira pilosicoli WesB   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Treponema pedis str. T A4   3 3
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Spirochaeta thermophila DSM 6578   5 5
No Yes Thermotoga maritima MSB8   3 3
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Leptospirillum ferriphilum ML-04   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Bdellovibrio exovorus JSS   2 2
No Yes Bdellovibrio bacteriovorus str. Tiberius   3 3
No Yes Arcobacter butzleri 7h1h   2 2
No Yes Arcobacter butzleri ED-1   4 4
No Yes Desulfocapsa sulfexigens DSM 10523   15 15
No Yes Desulfobacula toluolica Tol2   12 12
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   26 26
No Yes Desulfovibrio vulgaris RCH1   10 10
No Yes Desulfovibrio vulgaris str. 'Miyazaki F'   13 13
No Yes Desulfovibrio vulgaris str. Hildenborough   9 9
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   17 17
No Yes Desulfovibrio desulfuricans ND132   6 6
No Yes Geobacter sp. M18   13 13
No Yes Geobacter sulfurreducens PCA   13 13
No Yes Sorangium cellulosum So0157-2   5 5
No Yes Anaeromyxobacter sp. K   4 4
No Yes Anaeromyxobacter dehalogenans 2CP-C   4 4
No Yes Myxococcus stipitatus DSM 14675   7 7
No Yes Burkholderia phenoliruptrix BR3459a   7 7
No Yes Pandoraea pnomenusa 3kgm   12 12
No Yes Ralstonia pickettii 12J   7 7
No Yes Ralstonia solanacearum FQY_4   9 9
No Yes Ralstonia solanacearum Po82   8 8
No Yes Ralstonia solanacearum PSI07   10 10
No Yes Ralstonia solanacearum CMR15   8 8
No Yes Ralstonia solanacearum GMI1000   7 7
No Yes Burkholderia sp. YI23   8 8
No Yes Burkholderia sp. CCGE1003   8 8
No Yes Burkholderia sp. CCGE1001   7 7
No Yes Burkholderia sp. KJ006   9 9
No Yes Burkholderia thailandensis MSMB121   6 6
No Yes Burkholderia pseudomallei MSHR305   5 5
No Yes Burkholderia pseudomallei NCTC 13179   6 6
No Yes Burkholderia pseudomallei BPC006   5 5
No Yes Burkholderia pseudomallei 1026b   5 5
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   5 5
No Yes Burkholderia pseudomallei 1710b   5 5
No Yes Burkholderia pseudomallei K96243   5 5
No Yes Burkholderia mallei NCTC 10229   4 4
No Yes Burkholderia mallei NCTC 10247   4 4
No Yes Burkholderia mallei ATCC 23344   4 4
No Yes Burkholderia lata   8 8
No Yes Burkholderia ambifaria MC40-6   10 10
No Yes Burkholderia cenocepacia MC0-3   7 7
No Yes Burkholderia cenocepacia AU 1054   7 7
No Yes Burkholderia cenocepacia J2315   8 8
No Yes Burkholderia multivorans ATCC 17616   5 5
No Yes Burkholderia cepacia GG4   8 8
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   15 15
No Yes Alicycliphilus denitrificans BC   11 11
No Yes Variovorax paradoxus B4   3 3
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella pertussis CS   2 2
No Yes Bordetella parapertussis 18323   2 2
No Yes Bordetella parapertussis Bpp5   4 4
No Yes Bordetella bronchiseptica MO149   4 4
No Yes Bordetella bronchiseptica 253   4 4
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   5 5
No Yes Nitrosomonas sp. AL212   10 10
No Yes Sulfuricella denitrificans skB26   20 20
No Yes Caulobacter crescentus CB15   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   2 2
No Yes Zymomonas mobilis subsp. mobilis CP4   2 2
No Yes Zymomonas mobilis subsp. mobilis ZM4   2 2
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   2 2
No Yes Phaeobacter gallaeciensis DSM 17395   3 3
No Yes Phaeobacter gallaeciensis DSM 26640   3 3
No Yes Leisingera methylohalidivorans DSM 14336   2 2
No Yes Octadecabacter antarcticus 307   3 3
No Yes Octadecabacter arcticus 238   1 1
No Yes Rhodobacter sphaeroides KD131   3 3
No Yes Rhodobacter sphaeroides ATCC 17025   2 2
No Yes Rhodobacter sphaeroides 2.4.1   3 3
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   16 16
No Yes Rhodospirillum rubrum ATCC 11170   13 13
No Yes Gluconacetobacter diazotrophicus PAl 5   3 3
No Yes Gluconobacter oxydans H24   1 1
No Yes Micavibrio aeruginosavorus EPB   2 2
No Yes Wolbachia endosymbiont of Drosophila melanogaster   1 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   1 1
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   1 1
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Dawn   1 1
No Yes Anaplasma marginale str. Gypsy Plains   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Orientia tsutsugamushi str. Ikeda   1 1
No Yes Rickettsia bellii RML369-C   1 1
No Yes Rickettsia canadensis str. CA410   1 1
No Yes Rickettsia typhi str. B9991CWPP   1 1
No Yes Rickettsia typhi str. TH1527   1 1
No Yes Rickettsia prowazekii str. Breinl   1 1
No Yes Rickettsia prowazekii str. NMRC Madrid E   1 1
No Yes Rickettsia prowazekii str. RpGvF24   1 1
No Yes Rickettsia prowazekii str. GvV257   1 1
No Yes Rickettsia prowazekii str. Dachau   1 1
No Yes Rickettsia prowazekii str. Katsinyian   1 1
No Yes Rickettsia prowazekii str. Chernikova   1 1
No Yes Rickettsia prowazekii Rp22   1 1
No Yes Rickettsia prowazekii str. Madrid E   1 1
No Yes Rickettsia slovaca str. D-CWPP   1 1
No Yes Rickettsia massiliae str. AZT80   1 1
No Yes Rickettsia rickettsii str. Arizona   1 1
No Yes Rickettsia rickettsii str. Brazil   1 1
No Yes Rickettsia rickettsii str. Hauke   1 1
No Yes Rickettsia rickettsii str. Colombia   1 1
No Yes Rickettsia rickettsii str. Hlp#2   1 1
No Yes Rickettsia rickettsii str. Hino   1 1
No Yes Rickettsia rickettsii str. Iowa   1 1
No Yes Methylobacterium extorquens DM4   10 10
No Yes Methylobacterium extorquens PA1   11 11
No Yes Brucella ceti TE10759-12   3 3
No Yes Brucella ceti TE28753-12   2 2
No Yes Brucella canis HSK A52141   3 3
No Yes Brucella suis VBI22   3 3
No Yes Brucella suis 1330   3 3
No Yes Brucella suis 1330   3 3
No Yes Brucella melitensis NI   3 3
No Yes Brucella melitensis M5-90   3 3
No Yes Brucella melitensis M28   3 3
No Yes Brucella melitensis bv. 1 str. 16M   3 3
No Yes Brucella abortus A13334   2 2
No Yes Brucella melitensis biovar Abortus 2308   2 2
No Yes Brucella abortus bv. 1 str. 9-941   2 2
No Yes Sinorhizobium fredii USDA 257   7 7
No Yes Sinorhizobium fredii HH103   7 7
No Yes Sinorhizobium meliloti 2011   2 2
No Yes Sinorhizobium meliloti GR4   3 3
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   2 2
No Yes Sinorhizobium meliloti 1021   2 2
No Yes Rhizobium etli CFN 42   9 9
No Yes Rhizobium etli bv. mimosae str. Mim1   7 7
No Yes Rhizobium tropici CIAT 899   5 5
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   11 11
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   8 8
No Yes Mesorhizobium australicum WSM2073   5 5
No Yes Hyphomicrobium nitrativorans NL23   7 7
No Yes Hyphomicrobium denitrificans 1NES1   3 3
No Yes Oligotropha carboxidovorans OM5   9 9
No Yes Oligotropha carboxidovorans OM5   9 9
No Yes Rhodopseudomonas palustris DX-1   13 13
No Yes Rhodopseudomonas palustris TIE-1   12 12
No Yes Rhodopseudomonas palustris HaA2   9 9
No Yes Rhodopseudomonas palustris BisB5   7 7
No Yes Rhodopseudomonas palustris BisB18   12 12
No Yes Rhodopseudomonas palustris CGA009   14 14
No Yes Bradyrhizobium sp. S23321   12 12
No Yes Bradyrhizobium sp. BTAi1   7 7
No Yes Bradyrhizobium oligotrophicum S58   13 13
No Yes Bradyrhizobium japonicum USDA 6   14 14
No Yes Simiduia agarivorans SA1 = DSM 21679   13 13
No Yes Aeromonas hydrophila ML09-119   10 10
No Yes Vibrio fischeri ES114   6 6
No Yes Vibrio sp. EJY3   7 7
No Yes Vibrio parahaemolyticus BB22OP   7 7
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   9 9
No Yes Vibrio anguillarum Listonella anguillarum M3   5 5
No Yes Vibrio nigripulchritudo VibrioScope   13 13
No Yes Vibrio vulnificus CMCP6   14 14
No Yes Vibrio vulnificus YJ016   14 14
No Yes Vibrio cholerae LMA3984-4   7 7
No Yes Vibrio cholerae M66-2   7 7
No Yes Vibrio cholerae O395   7 7
No Yes Vibrio cholerae IEC224   7 7
No Yes Vibrio cholerae O1 str. 2010EL-1786   7 7
No Yes Vibrio cholerae MJ-1236   7 7
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   7 7
No Yes Idiomarina loihiensis GSL 199   9 9
No Yes Shewanella sp. W3-18-1   10 10
No Yes Shewanella sp. ANA-3   15 15
No Yes Shewanella baltica BA175   13 13
No Yes Shewanella baltica OS678   15 15
No Yes Shewanella baltica OS117   12 12
No Yes Shewanella baltica OS223   14 14
No Yes Shewanella baltica OS195   15 15
No Yes Shewanella baltica OS155   13 13
No Yes Shewanella sp. MR-7   16 16
No Yes Shewanella putrefaciens 200   11 11
No Yes Glaciecola psychrophila 170   8 8
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   4 4
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   4 4
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   5 5
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   5 5
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   5 5
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   5 5
No Yes Alteromonas macleodii str. 'English Channel 615'   6 6
No Yes Alteromonas macleodii AltDE1   4 4
No Yes Alteromonas macleodii str. 'English Channel 673'   9 9
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   9 9
No Yes Alteromonas macleodii str. 'Black Sea 11'   8 8
No Yes Alteromonas macleodii ATCC 27126   9 9
No Yes Alcanivorax dieselolei B5   3 3
No Yes Thalassolituus oleivorans MIL-1   20 20
No Yes Stenotrophomonas maltophilia D457   10 10
No Yes Stenotrophomonas maltophilia JV3   10 10
No Yes Stenotrophomonas maltophilia R551-3   11 11
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   8 8
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   7 7
No Yes Xanthomonas axonopodis pv. citrumelo F1   8 8
No Yes Xanthomonas axonopodis Xac29-1   7 7
No Yes Xanthomonas oryzae pv. oryzicola BLS256   6 6
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   5 5
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   5 5
No Yes Xanthomonas campestris pv. raphani 756C   10 10
No Yes Xanthomonas campestris pv. campestris str. 8004   10 10
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   10 10
No Yes Thioalkalivibrio nitratireducens DSM 14787   6 6
No Yes Thioflavicoccus mobilis 8321   4 4
No Yes Legionella pneumophila str. Paris   5 5
No Yes Legionella pneumophila str. Lens   5 5
No Yes Legionella pneumophila subsp. pneumophila LPE509   6 6
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   4 4
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   4 4
No Yes Legionella pneumophila subsp. pneumophila   4 4
No Yes Legionella pneumophila subsp. pneumophila   6 6
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   4 4
No Yes Legionella pneumophila 2300/99 Alcoy   5 5
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   6 6
No Yes Yersinia pseudotuberculosis PB1/+   2 2
No Yes Yersinia pseudotuberculosis YPIII   2 2
No Yes Yersinia pseudotuberculosis IP 32953   2 2
No Yes Yersinia pestis biovar Microtus str. 91001   2 2
No Yes Yersinia pestis A1122   2 2
No Yes Yersinia pestis Z176003   2 2
No Yes Yersinia pestis D182038   2 2
No Yes Yersinia pestis D106004   2 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   2 2
No Yes Yersinia pestis Nepal516   2 2
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis Angola   2 2
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   2 2
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   5 5
No Yes Yersinia enterocolitica subsp. palearctica Y11   4 4
No Yes Serratia sp. AS13   5 5
No Yes Serratia plymuthica S13   4 4
No Yes Serratia plymuthica 4Rx13   4 4
No Yes Serratia marcescens FGI94   5 5
No Yes Serratia marcescens WW4   3 3
No Yes Serratia liquefaciens ATCC 27592   3 3
No Yes Dickeya dadantii Ech586   6 6
No Yes Dickeya dadantii 3937   3 3
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   5 5
No Yes Pantoea ananatis LMG 5342   6 6
No Yes Pantoea ananatis PA13   6 6
No Yes Pantoea ananatis AJ13355   6 6
No Yes Erwinia pyrifoliae DSM 12163   3 3
No Yes Erwinia amylovora CFBP1430   3 3
No Yes Cronobacter sakazakii CMCC 45402   5 5
No Yes Cronobacter sakazakii SP291   5 5
No Yes Cronobacter sakazakii ATCC BAA-894   6 6
No Yes Raoultella ornithinolytica B6   6 6
No Yes Shigella sonnei 53G   4 4
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   2 2
No Yes Shigella boydii Sb227   2 2
No Yes Salmonella bongori N268-08   3 3
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   2 2
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   2 2
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   2 2
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   2 2
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   2 2
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   2 2
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   3 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   2 2
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   2 2
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   2 2
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   3 3
No Yes Salmonella enterica serovar Bovismorbificans genomics   3 3
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   2 2
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   2 2
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   3 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   3 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   3 3
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   2 2
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   2 2
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   3 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   3 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   3 3
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   3 3
No Yes Klebsiella oxytoca KCTC 1686   4 4
No Yes Klebsiella pneumoniae JM45   5 5
No Yes Klebsiella pneumoniae CG43   6 6
No Yes Klebsiella pneumoniae KCTC 2242   4 4
No Yes Klebsiella pneumoniae 342   7 7
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   5 5
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   6 6
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   6 6
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   6 6
No Yes Enterobacter aerogenes EA1509E   5 5
No Yes Escherichia coli E24377A   5 5
No Yes Escherichia coli E. coli PMV-1   4 4
No Yes Escherichia coli JJ1886   4 4
No Yes Escherichia coli LY180   4 4
No Yes Escherichia coli APEC O78   5 5
No Yes Escherichia coli O7:K1 str. CE10   5 5
No Yes Escherichia coli O104:H4 str. 2009EL-2050   5 5
No Yes Escherichia coli O104:H4 str. 2009EL-2071   5 5
No Yes Escherichia coli O104:H4 str. 2011C-3493   5 5
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli P12b   5 5
No Yes Escherichia coli str. 'clone D i2'   4 4
No Yes Escherichia coli str. 'clone D i14'   4 4
No Yes Escherichia coli UM146   4 4
No Yes Escherichia coli 042   4 4
No Yes Escherichia coli Xuzhou21   5 5
No Yes Escherichia coli IHE3034   4 4
No Yes Escherichia coli UMNK88   3 3
No Yes Escherichia coli O83:H1 str. NRG 857C   4 4
No Yes Escherichia coli ABU 83972   3 3
No Yes Escherichia coli KO11FL   5 5
No Yes Escherichia coli KO11FL   5 5
No Yes Escherichia coli LF82   4 4
No Yes Escherichia coli ED1a   3 3
No Yes Escherichia coli IAI39   5 5
No Yes Escherichia coli UMN026   4 4
No Yes Escherichia coli 55989   3 3
No Yes Escherichia coli S88   4 4
No Yes Escherichia coli IAI1   4 4
No Yes Escherichia coli W   5 5
No Yes Escherichia coli W   5 5
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli ATCC 8739   5 5
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli SMS-3-5   5 5
No Yes Escherichia coli SE15   4 4
No Yes Escherichia coli SE11   5 5
No Yes Escherichia coli APEC O1   4 4
No Yes Escherichia coli O103:H2 str. 12009   4 4
No Yes Escherichia coli UTI89   4 4
No Yes Escherichia coli 536   4 4
No Yes Escherichia coli HS   4 4
No Yes Escherichia coli ETEC H10407   5 5
No Yes Escherichia coli O55:H7 str. RM12579   4 4
No Yes Escherichia coli O55:H7 str. CB9615   4 4
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli CFT073   4 4
No Yes Escherichia coli O111:H- str. 11128   4 4
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   5 5
No Yes Escherichia coli O157:H7 str. EC4115   5 5
No Yes Escherichia coli O157:H7 str. Sakai   5 5
No Yes Escherichia coli O157:H7 str. EDL933   5 5
No Yes Escherichia coli str. K-12 substr. MDS42   3 3
No Yes Escherichia coli BW2952   5 5
No Yes Escherichia coli str. K-12 substr. MG1655   5 5
No Yes Escherichia coli str. K-12 substr. W3110   5 5
No Yes Escherichia coli str. K-12 substr. DH10B   4 4
No Yes Escherichia coli B str. REL606   4 4
No Yes Enterobacter cloacae SCF1   7 7
No Yes Enterobacter cloacae EcWSU1   5 5
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   3 3
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   5 5
No Yes Azotobacter vinelandii CA6   5 5
No Yes Azotobacter vinelandii CA   5 5
No Yes Pseudomonas denitrificans ATCC 13867   18 18
No Yes Pseudomonas syringae pv. phaseolicola 1448A   11 11
No Yes Pseudomonas syringae pv. syringae B728a   11 11
No Yes Pseudomonas stutzeri CCUG 29243   12 12
No Yes Pseudomonas stutzeri DSM 10701   6 6
No Yes Pseudomonas stutzeri DSM 4166   13 13
No Yes Pseudomonas stutzeri RCH2   16 16
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   13 13
No Yes Pseudomonas monteilii SB3101   14 14
No Yes Pseudomonas monteilii SB3078   13 13
No Yes Pseudomonas putida H8234   15 15
No Yes Pseudomonas putida HB3267   14 14
No Yes Pseudomonas putida NBRC 14164   13 13
No Yes Pseudomonas putida DOT-T1E   16 16
No Yes Pseudomonas putida S16   14 14
No Yes Pseudomonas putida BIRD-1   16 16
No Yes Pseudomonas putida W619   14 14
No Yes Pseudomonas putida ND6   16 16
No Yes Pseudomonas putida KT2440   16 16
No Yes Pseudomonas putida GB-1   14 14
No Yes Pseudomonas protegens CHA0   14 14
No Yes Pseudomonas poae RE*1-1-14   11 11
No Yes Pseudomonas fluorescens F113   15 15
No Yes Pseudomonas fluorescens A506   11 11
No Yes Pseudomonas fluorescens R124   13 13
No Yes Pseudomonas fluorescens Pf0-1   15 15
No Yes Pseudomonas resinovorans NBRC 106553   21 21
No Yes Pseudomonas mendocina NK-01   20 20
No Yes Pseudomonas aeruginosa SCV20265   15 15
No Yes Pseudomonas aeruginosa MTB-1   15 15
No Yes Pseudomonas aeruginosa LES431   16 16
No Yes Pseudomonas aeruginosa RP73   14 14
No Yes Pseudomonas aeruginosa B136-33   16 16
No Yes Pseudomonas aeruginosa PA1R   14 14
No Yes Pseudomonas aeruginosa PA1   15 15
No Yes Pseudomonas aeruginosa DK2   16 16
No Yes Pseudomonas aeruginosa NCGM2.S1   15 15
No Yes Pseudomonas aeruginosa M18   15 15
No Yes Pseudomonas aeruginosa LESB58   15 15
No Yes Pseudomonas aeruginosa PA7   15 15
No Yes Pseudomonas aeruginosa PAO1   15 15
No Yes Acinetobacter genomosp. 13TU RUH2624   5 5
No Yes Acinetobacter sp. SH024   5 5
No Yes Acinetobacter calcoaceticus ruh2202   3 3
No Yes Acinetobacter baumannii ZW85-1   5 5
No Yes Acinetobacter baumannii TYTH-1   5 5
No Yes Acinetobacter baumannii BJAB0868   5 5
No Yes Acinetobacter baumannii BJAB0715   5 5
No Yes Acinetobacter baumannii BJAB07104   5 5
No Yes Acinetobacter baumannii TCDC-AB0715   5 5
No Yes Acinetobacter baumannii D1279779   5 5
No Yes Acinetobacter baumannii MDR-TJ   5 5
No Yes Acinetobacter baumannii 1656-2   5 5
No Yes Acinetobacter baumannii ATCC 19606   5 5
No Yes Acinetobacter baumannii AB307-0294   4 4
No Yes Acinetobacter baumannii AYE   5 5
No Yes Acinetobacter baumannii SDF   2 2
No Yes Acinetobacter baumannii MDR-ZJ06   5 5
No Yes Acinetobacter baumannii AB0057   5 5
No Yes Acinetobacter baumannii ACICU   5 5
No Yes Acinetobacter radioresistens SH164   8 8
No Yes Acinetobacter junii SH205   6 6
No Yes Acinetobacter johnsonii SH046   4 4
No Yes Acinetobacter lwoffii SH145   7 7
No Yes Methylophaga sp. JAM7   11 11
No Yes Cycloclasticus zancles 7-ME   7 7
No Yes Ricinus communis (Early assembly) Castor bean 7 7
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   5 5
No Yes 1_050719N (meta-genome)   13 13
No Yes 2_050719S (meta-genome)   8 8
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   14 14
No Yes 4_050719Q (meta-genome)   42 42
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   35 35
No Yes 5_Below_upper_mesopelagic (meta-genome)   2 2
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   8 8
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   17 17
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   22 22
No Yes Bath Hot Springs, filamentous community (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   10 10
No Yes Combined (meta-genome)   36 36
No Yes Crater Hills (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   55 55
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   13 13
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   21 21
No Yes Dump bottom (Dump bottom) (meta-genome)   22 22
No Yes Dump top (Dump top) (meta-genome)   16 16
No Yes Endophytic microbiome from Rice (meta-genome)   12 12
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   52 52
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   9 9
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   26 26
No Yes Fungus garden combined (combined) (meta-genome)   30 30
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   24 24
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   36 36
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   15 15
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   8 8
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   37 37
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   15 15
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   13 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   9 9
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   3 3
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   10 10
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   158 158
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   23 23
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   35 35
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   36 36
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   64 64
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   27 27
No Yes NCBI 2017_08 genome   253356 253352
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   38 38
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   4 4
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   8 8
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   43 43
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   39 39
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   59 59
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   20 20
No Yes Sludge/US, Jazz Assembly (meta-genome)   17 17
No Yes Sludge/US, Phrap Assembly (meta-genome)   32 32
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   42 42
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   27 27
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   19 19
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   14 14
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   11 11
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   33 33
No Yes STRING v9.0.5 (STRING)   3213 3213
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   32 32
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   64934 64931
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   4 4
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   28 28
No Yes Global Ocean Sampling Expedition (GOS)   302 302
No Yes NCBI plasmid sequences (Plasmids)   167 167
No Yes NCBI viral sequences (Viral)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   13 13
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   58 58
No Yes TargetDB (Targets)   171 171
No Yes The Salmonella enterica Pan-genome (meta-genome)   73 73

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.