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Prenyltransferase-like family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1zdyA   1.1e-135   0.00000000376   6-293   1zdy A:3-303  

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View all assignments containing a Prenyltransferase-like domain in each group of genomes.

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Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   321 321
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes NCBI 2017_08 genome   194 194
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   1 1
No Yes Uniprot 2018_03 genome   97 97
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   18 18

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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