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TTHC002-like superfamily domain assignments
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PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
2dbsA   1.83e-36   7-85   TTHC002-like  

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View all assignments containing a TTHC002-like domain in each group of genomes.

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Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   73 73
No Yes Thermus thermophilus HB8   2 2
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   17 17
No Yes STRING v9.0.5 (STRING)   2 2
No Yes Uniprot 2018_03 genome   19 19
No Yes NCBI plasmid sequences (Plasmids)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   4 4
No Yes TargetDB (Targets)   1 1

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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