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E2 regulatory, transactivation domain superfamily domain assignments
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PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
1dtoA   1.24e-121   23-213   E2 regulatory, transactivation domain  
1qqhA   2.42e-76   1-129   E2 regulatory, transactivation domain  
1r6kA   2.2e-127   11-201   E2 regulatory, transactivation domain  
1r6nA   2.42e-127   11-201   E2 regulatory, transactivation domain  
1tueB   1.1e-119   10-201   E2 regulatory, transactivation domain  
2nnuA   8.05e-122   7-197   E2 regulatory, transactivation domain  

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View all assignments containing a E2 regulatory, transactivation domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1876 1876
No Yes NCBI 2017_08 genome   154 154
No Yes Uniprot 2018_03 genome   1190 1189
No Yes NCBI viral sequences (Viral)   122 122
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   13 13
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   57 57
No Yes UniProt viral sequences (Viral)   330 329

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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