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  Home > Genomes > STRING v9.0.5 > Protein HNS-dependent expression A; HdeA domains


Protein HNS-dependent expression A; HdeA superfamily domain assignments
in
STRING v9.0.5

Assignment details

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STRING v9.0.5 (STRING) has 69 significant domains in 69 proteins.

     

Sequence ID   Evalue   Region   Family  
155864.Z4922   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
187410.y1246   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
198214.SF3544   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
198215.S4223   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
199310.c4321   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
204722.BRA0341   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
214092.YPO2674   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
224914.BMEII0906   2.09e-42   2-79   Protein HNS-dependent expression A; HdeA  
229193.YP_2475   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
262698.BruAb2_0840   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
273123.YPTB2935   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
300267.SDY_3543   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
300268.SBO_3509   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
300269.SSON_3576   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
316385.ECDH10B_3686   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
316407.hdeA   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
331111.EcE24377A_3996   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
331112.EcHS_A3712   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
344609.SbBS512_E3908   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
349746.YpAngola_A3563   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
349747.YpsIP31758_1086   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
359391.BAB2_0862   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
360102.YPA_2402   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
360910.BAV2620   2.62e-21   25-92   Protein HNS-dependent expression A; HdeA  
360910.BAV2796   5.75e-21   25-92   Protein HNS-dependent expression A; HdeA  
362663.ECP_3608   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
364106.UTI89_C4041   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
373384.SFV_3524   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
377628.YPN_1159   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
386585.ECs4390   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
386656.YPDSF_1601   0.0000248   33-95   Protein HNS-dependent expression A; HdeA  
393305.YE0960   0.0000275   35-95   Protein HNS-dependent expression A; HdeA  
397945.Aave_0086   0.0000000418   48-115   Protein HNS-dependent expression A; HdeA  
405955.APECO1_2939   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
409438.ECSE_3778   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
413997.ECB_03358   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
419610.Mext_3828   1.7e-20   42-119   Protein HNS-dependent expression A; HdeA  
430066.BAbS19_II07960   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
439855.EcSMS35_3812   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
440085.Mchl_4137   1.7e-20   42-119   Protein HNS-dependent expression A; HdeA  
441620.Mpop_5125   2.22e-21   42-119   Protein HNS-dependent expression A; HdeA  
444178.BOV_A0312   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
444450.ECH74115_4869   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
469008.ECBD_0231   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
470137.BSUIS_B0347   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
481805.EcolC_0207   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
483179.BCAN_B0343   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
502800.YPK_1140   0.0000314   33-94   Protein HNS-dependent expression A; HdeA  
502801.YPTS_3051   0.0000445   33-94   Protein HNS-dependent expression A; HdeA  
511145.b3510   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
544404.ECSP_4499   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
546272.BMEA_B0341   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
557598.LHK_00745   1.7e-21   34-99   Protein HNS-dependent expression A; HdeA  
557598.LHK_01046   7.32e-25   26-101   Protein HNS-dependent expression A; HdeA  
568815.BMI_II337   7.59e-42   37-114   Protein HNS-dependent expression A; HdeA  
573235.ECO26_4600   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
574521.E2348C_3752   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
585034.ECIAI1_3658   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
585035.ECS88_3922   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
585054.EFER_3035   4.05e-40   47-125   Protein HNS-dependent expression A; HdeA  
585055.EC55989_3953   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
585056.ECUMN_4010   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
585057.ECIAI39_4012   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
585395.ECO103_4238   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
585396.ECO111_4324   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
585397.ECED1_4188   2.48e-43   30-108   Protein HNS-dependent expression A; HdeA  
595496.BWG_3199   1.44e-43   30-108   Protein HNS-dependent expression A; HdeA  
626418.bglu_2g05450   0.0000000124   35-99   Protein HNS-dependent expression A; HdeA  
661410.METDI4809   8.89e-20   42-119   Protein HNS-dependent expression A; HdeA  
 
Weak hits:
135651.CBN02202   0.0785   36-76   Protein HNS-dependent expression A; HdeA  
155864.Z4921   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
162425.CADANIAP00004729   0.00719   46-76   Protein HNS-dependent expression A; HdeA  
198214.SF3543   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
198215.S4224   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
199310.c4320   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
203122.Sde_1284   0.0196   60-102   Protein HNS-dependent expression A; HdeA  
203122.Sde_2060   0.0222   85-108   Protein HNS-dependent expression A; HdeA  
209261.t1475   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
216595.PFLU0127   0.0759   159-200   Protein HNS-dependent expression A; HdeA  
216895.VV1_1806   0.0262   10-57   Protein HNS-dependent expression A; HdeA  
220341.STY1501   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
243275.TDE2166   0.017   20-49   Protein HNS-dependent expression A; HdeA  
246196.MSMEG_1076   0.00262   29-78   Protein HNS-dependent expression A; HdeA  
272620.KPN_03484   0.0118   32-93   Protein HNS-dependent expression A; HdeA  
272994.SPAB_01737   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
295319.SPA1308   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
300267.SDY_3544   0.00523   37-100   Protein HNS-dependent expression A; HdeA  
300268.SBO_3508   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
300269.SSON_3577   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
316385.ECDH10B_3685   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
316407.hdeB   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
321314.SC1563   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
331111.EcE24377A_3995   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
331112.EcHS_A3711   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
33178.CADATEAP00009084   0.0392   82-109   Protein HNS-dependent expression A; HdeA  
338187.VIBHAR_07103   0.0209   4-40   Protein HNS-dependent expression A; HdeA  
344609.SbBS512_E3907   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
362663.ECP_3607   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
364106.UTI89_C4040   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
373384.SFV_3523   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
386585.ECs4389   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
393305.YE1745   0.00144   30-91   Protein HNS-dependent expression A; HdeA  
395961.Cyan7425_3506   0.000589   38-96   Protein HNS-dependent expression A; HdeA  
405955.APECO1_2940   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
409438.ECSE_3777   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
413997.ECB_03357   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
41514.SARI_01409   0.00811   37-102   Protein HNS-dependent expression A; HdeA  
423368.SNSL254_A1676   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
439843.SeSA_A1674   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
439851.SeD_A1781   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
439855.EcSMS35_3811   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
444450.ECH74115_4868   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
454166.SeAg_B1603   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
454169.SeHA_C1739   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
469008.ECBD_0232   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
471853.Bcav_2561   0.0235   53-97   Protein HNS-dependent expression A; HdeA  
476213.SPC_2176   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
481805.EcolC_0208   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
484021.KP1_4777   0.0144   38-99   Protein HNS-dependent expression A; HdeA  
485917.Phep_1273   0.0235   142-169   Protein HNS-dependent expression A; HdeA  
498217.ETAE_2691   0.00183   38-96   Protein HNS-dependent expression A; HdeA  
498217.ETAE_2870   0.00262   45-106   Protein HNS-dependent expression A; HdeA  
507522.KPK_0631   0.0116   32-93   Protein HNS-dependent expression A; HdeA  
511145.b3509   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
544404.ECSP_4498   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
550537.SEN1493   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
550538.SG1565   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
554290.SSPA1215   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
5691.Tb927.6.3340   0.017   56-80   Protein HNS-dependent expression A; HdeA  
573235.ECO26_4599   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
574521.E2348C_3751   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
585034.ECIAI1_3657   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
585035.ECS88_3921   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
585055.EC55989_3952   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
585056.ECUMN_4009   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
585057.ECIAI39_4011   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
585395.ECO103_4237   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
585396.ECO111_4323   0.00497   37-100   Protein HNS-dependent expression A; HdeA  
585397.ECED1_4187   0.00589   33-96   Protein HNS-dependent expression A; HdeA  
595496.BWG_3198   0.00445   33-96   Protein HNS-dependent expression A; HdeA  
634503.NT01EI_2999   0.00785   38-95   Protein HNS-dependent expression A; HdeA  
634503.NT01EI_3246   0.00418   30-92   Protein HNS-dependent expression A; HdeA  
668336.D11S_0506   0.0248   30-54   Protein HNS-dependent expression A; HdeA  
7460.XP_001120925   0.0589   465-507   Protein HNS-dependent expression A; HdeA  
7739.JGI214369   0.0654   96-125   Protein HNS-dependent expression A; HdeA  
7955.ENSDARP00000098211   0.0405   300-365   Protein HNS-dependent expression A; HdeA  
7955.ENSDARP00000101052   0.034   184-249   Protein HNS-dependent expression A; HdeA  
9615.ENSCAFP00000027791   0.0589   87-114   Protein HNS-dependent expression A; HdeA  
9685.ENSFCAP00000000717   0.0693   127-154   Protein HNS-dependent expression A; HdeA  
9913.ENSBTAP00000022805   0.0719   83-110   Protein HNS-dependent expression A; HdeA  
99287.STM1562   0.00876   37-102   Protein HNS-dependent expression A; HdeA  
9986.ENSOCUP00000008822   0.068   86-113   Protein HNS-dependent expression A; HdeA  
99883.ENSTNIP00000015662   0.0458   31-72   Protein HNS-dependent expression A; HdeA  

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View all assignments containing a Protein HNS-dependent expression A; HdeA domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   10333 10333
No Yes Capitella sp. I   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Bordetella avium 197N   2 2
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Methylocystis sp. SC2   2 2
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes NCBI 2017_08 genome   9515 9514
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   69 69
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   542 540
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   11 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   27 27
No Yes TargetDB (Targets)   1 1

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.