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YdeN-like family domain assignments


No domain assignments for these genomes.

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View all assignments containing a YdeN-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   2164 2164
No Yes Mycoplasma penetrans HF-2   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Arcobacter sp. L   1 1
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Methylobacillus flagellatus KT   2 2
No Yes Haemophilus parasuis SH0165   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Leuconostoc carnosum JB16   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Campylobacter coli 15-537360   1 1
No Yes Campylobacter coli CVM N29710   1 1
No Yes Acetobacter pasteurianus 386B   1 1
No Yes Mannheimia succiniciproducens MBEL55E   1 1
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Haemophilus parasuis ZJ0906   2 2
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1602 1602
No Yes STRING v9.0.5 (STRING)   15 15
No Yes Uniprot 2018_03 genome   448 448
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   4 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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