| Select to display | Genome | | Domains | Proteins |
|---|
| No Yes | ALL | | 18549 | 18549 |
| No Yes | Helobdella robusta | | 1 | 1 |
| No Yes | Danaus plexippus OGS1.0 | Monarch butterfly | 1 | 1 |
| No Yes | Nasonia vitripennis | Jewel wasp | 1 | 1 |
| No Yes | Apis mellifera 38.2d (Not maintained) | Honey bee | 2 | 2 |
| No Yes | Harpegnathos saltator v3.3 | Jerdon's jumping ant | 1 | 1 |
| No Yes | Pogonomyrmex barbatus v1.2 | Red harvester ant | 1 | 1 |
| No Yes | Acromyrmex echinatior v3.8 | Panamanian leafcutter ant | 1 | 1 |
| No Yes | Atta cephalotes v1.1 | | 1 | 1 |
| No Yes | Lucilia cuprina | Australian sheep blowfly | 1 | 1 |
| No Yes | Drosophila grimshawi 1.3 | | 1 | 1 |
| No Yes | Drosophila pseudoobscura 2.13 | | 1 | 1 |
| No Yes | Drosophila persimilis 1.3 | | 1 | 1 |
| No Yes | Drosophila suzukii | | 1 | 1 |
| No Yes | Drosophila yakuba 1.3 | | 1 | 1 |
| No Yes | Drosophila simulans 1.3 | | 1 | 1 |
| No Yes | Drosophila sechellia 1.3 | | 1 | 1 |
| No Yes | Drosophila melanogaster 76_5 | Fruit fly | 1 | 1 |
| No Yes | Drosophila erecta 1.3 | | 1 | 1 |
| No Yes | Drosophila ananassae 1.3 | | 1 | 1 |
| No Yes | Drosophila virilis 1.2 | | 1 | 1 |
| No Yes | Drosophila mojavensis 1.3 | | 1 | 1 |
| No Yes | Aedes aegypti 55 (Not maintained) | Yellow fever mosquito | 1 | 1 |
| No Yes | Anopheles gambiae 49_3j | African malaria mosquito | 1 | 1 |
| No Yes | Tribolium castaneum 3.0 | Red flour beetle | 1 | 1 |
| No Yes | Pediculus humanus corporis (Early assembly) | Human body louse | 1 | 1 |
| No Yes | Rhodnius prolixus 22 | | 1 | 1 |
| No Yes | Daphnia pulex | Common water flea | 1 | 1 |
| No Yes | Strigamia maritima 22 | | 1 | 1 |
| No Yes | Tetranychus urticae | Two-spotted spider mite | 1 | 1 |
| No Yes | Meloidogyne incognita | Southern root-knot nematode | 1 | 1 |
| No Yes | Caenorhabditis brenneri | | 1 | 1 |
| No Yes | Caenorhabditis remanei | | 1 | 1 |
| No Yes | Caenorhabditis elegans 76_235 | Roundworm | 2 | 2 |
| No Yes | Caenorhabditis briggsae 2 | | 1 | 1 |
| No Yes | Monosiga brevicollis | | 1 | 1 |
| No Yes | Capsaspora owczarzaki ATCC 30864 | | 1 | 1 |
| No Yes | Phytophthora capsici | | 1 | 1 |
| No Yes | Thermobispora bispora DSM 43833 | | 1 | 1 |
| No Yes | Nakamurella multipartita DSM 44233 | | 1 | 1 |
| No Yes | Modestobacter marinus | | 1 | 1 |
| No Yes | Geodermatophilus obscurus DSM 43160 | | 1 | 1 |
| No Yes | Kineococcus radiotolerans SRS30216 | | 1 | 1 |
| No Yes | Catenulispora acidiphila DSM 44928 | | 3 | 3 |
| No Yes | Stackebrandtia nassauensis DSM 44728 | | 1 | 1 |
| No Yes | Frankia symbiont of Datisca glomerata | | 1 | 1 |
| No Yes | Thermobifida fusca YX | | 1 | 1 |
| No Yes | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 | | 1 | 1 |
| No Yes | Streptosporangium roseum DSM 43021 | | 2 | 2 |
| No Yes | Kitasatospora setae KM-6054 | | 1 | 1 |
| No Yes | Streptomyces coelicolor A3(2) | | 1 | 1 |
| No Yes | Streptomyces sp. PAMC26508 | | 1 | 1 |
| No Yes | Streptomyces flavogriseus ATCC 33331 | | 1 | 1 |
| No Yes | Streptomyces sp. SirexAA-E | | 1 | 1 |
| No Yes | Streptomyces griseus subsp. griseus NBRC 13350 | | 1 | 1 |
| No Yes | Streptomyces bingchenggensis BCW-1 | | 2 | 2 |
| No Yes | Streptomyces violaceusniger Tu 4113 | | 1 | 1 |
| No Yes | Streptomyces avermitilis MA-4680 | | 1 | 1 |
| No Yes | Streptomyces cattleya NRRL 8057 = DSM 46488 | | 1 | 1 |
| No Yes | Streptomyces scabiei 87.22 | | 1 | 1 |
| No Yes | Streptomyces hygroscopicus subsp. jinggangensis 5008 | | 2 | 2 |
| No Yes | Actinosynnema mirum DSM 43827 | | 2 | 2 |
| No Yes | Pseudonocardia dioxanivorans CB1190 | | 1 | 1 |
| No Yes | Saccharopolyspora erythraea NRRL 2338 | | 1 | 1 |
| No Yes | Amycolatopsis mediterranei U32 | | 1 | 1 |
| No Yes | Kribbella flavida DSM 17836 | | 1 | 1 |
| No Yes | Nocardioides sp. JS614 | | 1 | 1 |
| No Yes | Microlunatus phosphovorus NM-1 | | 1 | 1 |
| No Yes | Salinispora arenicola CNS-205 | | 1 | 1 |
| No Yes | Salinispora tropica CNB-440 | | 1 | 1 |
| No Yes | Verrucosispora maris AB-18-032 | | 1 | 1 |
| No Yes | Micromonospora sp. L5 | | 1 | 1 |
| No Yes | Micromonospora aurantiaca ATCC 27029 | | 1 | 1 |
| No Yes | Actinoplanes sp. N902-109 | | 1 | 1 |
| No Yes | Actinoplanes sp. SE50/110 | | 1 | 1 |
| No Yes | Actinoplanes missouriensis 431 | | 1 | 1 |
| No Yes | Rhodococcus jostii RHA1 | | 1 | 1 |
| No Yes | Rhodococcus opacus B4 | | 1 | 1 |
| No Yes | Rhodococcus erythropolis PR4 | | 1 | 1 |
| No Yes | Kytococcus sedentarius DSM 20547 | | 1 | 1 |
| No Yes | Beutenbergia cavernae DSM 12333 | | 1 | 1 |
| No Yes | Arthrobacter phenanthrenivorans Sphe3 | | 1 | 1 |
| No Yes | Arthrobacter chlorophenolicus A6 | | 1 | 1 |
| No Yes | Arthrobacter aurescens TC1 | | 1 | 1 |
| No Yes | Arthrobacter arilaitensis Re117 | | 1 | 1 |
| No Yes | Arthrobacter sp. Rue61a | | 1 | 1 |
| No Yes | Arthrobacter sp. FB24 | | 1 | 1 |
| No Yes | Renibacterium salmoninarum ATCC 33209 | | 1 | 1 |
| No Yes | Herpetosiphon aurantiacus DSM 785 | | 1 | 1 |
| No Yes | Deinococcus gobiensis I-0 | | 1 | 1 |
| No Yes | Deinococcus deserti VCD115 | | 1 | 1 |
| No Yes | Deinococcus maricopensis DSM 21211 | | 1 | 1 |
| No Yes | Deinococcus geothermalis DSM 11300 | | 1 | 1 |
| No Yes | Deinococcus proteolyticus MRP | | 1 | 1 |
| No Yes | Deinococcus radiodurans R1 | | 1 | 1 |
| No Yes | Meiothermus silvanus DSM 9946 | | 1 | 1 |
| No Yes | Meiothermus ruber DSM 1279 | | 1 | 1 |
| No Yes | Exiguobacterium sp. MH3 | | 1 | 1 |
| No Yes | Exiguobacterium sp. AT1b | | 1 | 1 |
| No Yes | Exiguobacterium sibiricum 255-15 | | 1 | 1 |
| No Yes | Brevibacillus brevis NBRC 100599 | | 1 | 1 |
| No Yes | Solibacillus silvestris StLB046 | | 1 | 1 |
| No Yes | Oceanobacillus iheyensis HTE831 | | 1 | 1 |
| No Yes | Geobacillus thermodenitrificans NG80-2 | | 1 | 1 |
| No Yes | Halobacillus halophilus DSM 2266 | | 1 | 1 |
| No Yes | Bacillus weihenstephanensis KBAB4 | | 1 | 1 |
| No Yes | Bacillus thuringiensis str. Al Hakam | | 1 | 1 |
| No Yes | Bacillus cereus 03BB102 | | 1 | 1 |
| No Yes | Bacillus anthracis str. A0248 | | 1 | 1 |
| No Yes | Bacillus pseudofirmus OF4 | | 1 | 1 |
| No Yes | Bacillus clausii KSM-K16 | | 1 | 1 |
| No Yes | Bacillus megaterium DSM 319 | | 1 | 1 |
| No Yes | Saprospira grandis str. Lewin | | 1 | 1 |
| No Yes | Candidatus Koribacter versatilis Ellin345 | | 1 | 1 |
| No Yes | Bacteriovorax marinus SJ | | 1 | 1 |
| No Yes | Bdellovibrio bacteriovorus HD100 | | 1 | 1 |
| No Yes | Anaeromyxobacter dehalogenans 2CP-1 | | 1 | 1 |
| No Yes | Stigmatella aurantiaca DW4/3-1 | | 1 | 1 |
| No Yes | Corallococcus coralloides DSM 2259 | | 1 | 1 |
| No Yes | Myxococcus xanthus DK 1622 | | 1 | 1 |
| No Yes | Myxococcus fulvus HW-1 | | 1 | 1 |
| No Yes | Thiomonas arsenitoxydans | | 1 | 1 |
| No Yes | Thiomonas intermedia K12 | | 1 | 1 |
| No Yes | Burkholderia phytofirmans PsJN | | 1 | 1 |
| No Yes | Burkholderia phymatum STM815 | | 1 | 1 |
| No Yes | Burkholderia xenovorans LB400 | | 1 | 1 |
| No Yes | Ralstonia eutropha JMP134 | | 2 | 2 |
| No Yes | Cupriavidus taiwanensis LMG 19424 | | 1 | 1 |
| No Yes | Cupriavidus metallidurans CH34 | | 1 | 1 |
| No Yes | Cupriavidus necator N-1 | | 1 | 1 |
| No Yes | Ralstonia eutropha H16 | | 2 | 2 |
| No Yes | Ralstonia pickettii 12D | | 1 | 1 |
| No Yes | Ralstonia solanacearum CFBP2957 | | 1 | 1 |
| No Yes | Burkholderia sp. RPE64 | | 1 | 1 |
| No Yes | Burkholderia sp. CCGE1002 | | 1 | 1 |
| No Yes | Burkholderia thailandensis E264 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei 1106a | | 1 | 1 |
| No Yes | Burkholderia mallei SAVP1 | | 1 | 1 |
| No Yes | Burkholderia ambifaria AMMD | | 1 | 1 |
| No Yes | Burkholderia cenocepacia HI2424 | | 1 | 1 |
| No Yes | Burkholderia multivorans ATCC 17616 | | 1 | 1 |
| No Yes | Burkholderia vietnamiensis G4 | | 1 | 1 |
| No Yes | Burkholderia gladioli BSR3 | | 1 | 1 |
| No Yes | Burkholderia glumae BGR1 | | 1 | 1 |
| No Yes | Ramlibacter tataouinensis TTB310 | | 1 | 1 |
| No Yes | Delftia sp. Cs1-4 | | 2 | 2 |
| No Yes | Delftia acidovorans SPH-1 | | 2 | 2 |
| No Yes | Polaromonas sp. JS666 | | 1 | 1 |
| No Yes | Polaromonas naphthalenivorans CJ2 | | 1 | 1 |
| No Yes | Variovorax paradoxus S110 | | 2 | 2 |
| No Yes | Acidovorax ebreus TPSY | | 1 | 1 |
| No Yes | Acidovorax sp. KKS102 | | 1 | 1 |
| No Yes | Acidovorax citrulli AAC00-1 | | 1 | 1 |
| No Yes | Acidovorax avenae subsp. avenae ATCC 19860 | | 1 | 1 |
| No Yes | Comamonas testosteroni CNB-2 | | 1 | 1 |
| No Yes | Collimonas fungivorans Ter331 | | 1 | 1 |
| No Yes | Advenella kashmirensis WT001 | | 1 | 1 |
| No Yes | Bordetella petrii DSM 12804 | | 1 | 1 |
| No Yes | Bordetella avium 197N | | 1 | 1 |
| No Yes | Bordetella pertussis Tohama I | | 1 | 1 |
| No Yes | Bordetella parapertussis 12822 | | 1 | 1 |
| No Yes | Bordetella bronchiseptica RB50 | | 1 | 1 |
| No Yes | Achromobacter xylosoxidans A8 | | 1 | 1 |
| No Yes | Achromobacter xylosoxidans | | 1 | 1 |
| No Yes | Brevundimonas subvibrioides ATCC 15264 | | 1 | 1 |
| No Yes | Caulobacter sp. K31 | | 1 | 1 |
| No Yes | Caulobacter crescentus NA1000 | | 1 | 1 |
| No Yes | Phenylobacterium zucineum HLK1 | | 1 | 1 |
| No Yes | Erythrobacter litoralis HTCC2594 | | 1 | 1 |
| No Yes | Sphingopyxis alaskensis RB2256 | | 1 | 1 |
| No Yes | Novosphingobium sp. PP1Y | | 1 | 1 |
| No Yes | Maricaulis maris MCS10 | | 1 | 1 |
| No Yes | Phaeobacter gallaeciensis 2.10 | | 1 | 1 |
| No Yes | Pseudovibrio sp. FO-BEG1 | | 1 | 1 |
| No Yes | Jannaschia sp. CCS1 | | 1 | 1 |
| No Yes | Ruegeria sp. TM1040 | | 1 | 1 |
| No Yes | Ruegeria pomeroyi DSS-3 | | 1 | 1 |
| No Yes | Rhodospirillum centenum SW | | 1 | 1 |
| No Yes | Azospirillum lipoferum 4B | | 1 | 1 |
| No Yes | Azospirillum sp. B510 | | 1 | 1 |
| No Yes | Polymorphum gilvum SL003B-26A1 | | 1 | 1 |
| No Yes | Micavibrio aeruginosavorus ARL-13 | | 1 | 1 |
| No Yes | Mesorhizobium opportunistum WSM2075 | | 1 | 1 |
| No Yes | Mesorhizobium ciceri biovar biserrulae WSM1271 | | 1 | 1 |
| No Yes | Mesorhizobium loti MAFF303099 | | 1 | 1 |
| No Yes | Bradyrhizobium japonicum USDA 110 | | 1 | 1 |
| No Yes | Bradyrhizobium sp. ORS 278 | | 1 | 1 |
| No Yes | Shewanella woodyi ATCC 51908 | | 1 | 1 |
| No Yes | Alteromonas sp. SN2 | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Deep ecotype' | | 1 | 1 |
| No Yes | Kangiella koreensis DSM 16069 | | 1 | 1 |
| No Yes | Halomonas elongata DSM 2581 | | 1 | 1 |
| No Yes | Rhodanobacter denitrificans | | 1 | 1 |
| No Yes | Frateuria aurantia DSM 6220 | | 1 | 1 |
| No Yes | Pseudoxanthomonas spadix BD-a59 | | 1 | 1 |
| No Yes | Pseudoxanthomonas suwonensis 11-1 | | 1 | 1 |
| No Yes | Stenotrophomonas maltophilia K279a | | 1 | 1 |
| No Yes | Xanthomonas axonopodis pv. citri str. 306 | | 1 | 1 |
| No Yes | Xanthomonas albilineans GPE PC73 | | 1 | 1 |
| No Yes | Xanthomonas oryzae pv. oryzae PXO99A | | 1 | 1 |
| No Yes | Xanthomonas campestris pv. campestris str. B100 | | 1 | 1 |
| No Yes | Nitrosococcus halophilus Nc4 | | 1 | 1 |
| No Yes | Serratia sp. AS12 | | 1 | 1 |
| No Yes | Serratia plymuthica AS9 | | 1 | 1 |
| No Yes | Serratia proteamaculans 568 | | 1 | 1 |
| No Yes | Pseudomonas sp. TKP | | 1 | 1 |
| No Yes | Pseudomonas protegens Pf-5 | | 1 | 1 |
| No Yes | Pseudomonas fluorescens SBW25 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa UCBPP-PA14 | | 1 | 1 |
| No Yes | Drosophila melanogaster FlyBase 5.12 (FlyBase) | Fruit fly | 1 | 1 |
| No Yes | Anopheles gambiae VectorBase AgamP3.6 (VectorBase) | African malaria mosquito | 1 | 1 |
| No Yes | Caenorhabditis elegans WormBase WS218 (WormBase) | Roundworm | 1 | 1 |
| No Yes | Oryza sativa ssp. Indica (Subspecies) | Long-grained rice | 1 | 1 |
| No Yes | Frankia sp. EuI1c | | 1 | 1 |
| No Yes | Nocardiopsis alba ATCC BAA-2165 | | 1 | 1 |
| No Yes | Streptomyces albus J1074 | | 2 | 2 |
| No Yes | Streptomyces rapamycinicus NRRL 5491 | | 1 | 1 |
| No Yes | Streptomyces davawensis JCM 4913 | | 1 | 1 |
| No Yes | Streptomyces fulvissimus DSM 40593 | | 1 | 1 |
| No Yes | Streptomyces venezuelae ATCC 10712 | | 1 | 1 |
| No Yes | Streptomyces collinus Tu 365 | | 1 | 1 |
| No Yes | Streptomyces cattleya NRRL 8057 = DSM 46488 | | 1 | 1 |
| No Yes | Streptomyces hygroscopicus subsp. jinggangensis TL01 | | 2 | 2 |
| No Yes | Saccharothrix espanaensis DSM 44229 | | 1 | 1 |
| No Yes | Amycolatopsis mediterranei RB | | 1 | 1 |
| No Yes | Amycolatopsis mediterranei S699 | | 1 | 1 |
| No Yes | Amycolatopsis mediterranei S699 | | 1 | 1 |
| No Yes | Amycolatopsis orientalis HCCB10007 | | 1 | 1 |
| No Yes | Actinoplanes friuliensis DSM 7358 | | 1 | 1 |
| No Yes | Rhodococcus erythropolis CCM2595 | | 1 | 1 |
| No Yes | Nocardia brasiliensis ATCC 700358 | | 2 | 2 |
| No Yes | Exiguobacterium antarcticum B7 | | 1 | 1 |
| No Yes | Bacillus cereus subsp. cytotoxis NVH 391-98 | | 1 | 1 |
| No Yes | Bacillus toyonensis BCT-7112 | | 1 | 1 |
| No Yes | Bacillus thuringiensis HD-771 | | 1 | 1 |
| No Yes | Bacillus thuringiensis HD-789 | | 1 | 1 |
| No Yes | Bacillus thuringiensis MC28 | | 1 | 1 |
| No Yes | Bacillus thuringiensis serovar chinensis CT-43 | | 1 | 1 |
| No Yes | Bacillus thuringiensis YBT-1518 | | 1 | 1 |
| No Yes | Bacillus thuringiensis Bt407 | | 1 | 1 |
| No Yes | Bacillus thuringiensis serovar konkukian str. 97-27 | | 1 | 1 |
| No Yes | Bacillus thuringiensis serovar kurstaki str. HD73 | | 1 | 1 |
| No Yes | Bacillus thuringiensis BMB171 | | 1 | 1 |
| No Yes | Bacillus thuringiensis serovar finitimus YBT-020 | | 1 | 1 |
| No Yes | Bacillus thuringiensis serovar thuringiensis str. IS5056 | | 1 | 1 |
| No Yes | Bacillus cereus FRI-35 | | 1 | 1 |
| No Yes | Bacillus cereus biovar anthracis str. CI | | 1 | 1 |
| No Yes | Bacillus cereus AH820 | | 1 | 1 |
| No Yes | Bacillus cereus AH187 | | 1 | 1 |
| No Yes | Bacillus cereus B4264 | | 1 | 1 |
| No Yes | Bacillus cereus G9842 | | 1 | 1 |
| No Yes | Bacillus cereus Q1 | | 1 | 1 |
| No Yes | Bacillus cereus F837/76 | | 1 | 1 |
| No Yes | Bacillus cereus NC7401 | | 1 | 1 |
| No Yes | Bacillus cereus E33L | | 1 | 1 |
| No Yes | Bacillus cereus ATCC 14579 | | 1 | 1 |
| No Yes | Bacillus cereus ATCC 10987 | | 1 | 1 |
| No Yes | Bacillus anthracis str. H9401 | | 1 | 1 |
| No Yes | Bacillus anthracis str. CDC 684 | | 1 | 1 |
| No Yes | Bacillus anthracis str. 'Ames Ancestor' | | 1 | 1 |
| No Yes | Bacillus anthracis str. Sterne | | 1 | 1 |
| No Yes | Bacillus anthracis str. Ames | | 1 | 1 |
| No Yes | Bacillus megaterium QM B1551 | | 1 | 1 |
| No Yes | Bdellovibrio exovorus JSS | | 1 | 1 |
| No Yes | Bdellovibrio bacteriovorus str. Tiberius | | 1 | 1 |
| No Yes | Anaeromyxobacter sp. K | | 1 | 1 |
| No Yes | Anaeromyxobacter dehalogenans 2CP-C | | 1 | 1 |
| No Yes | Myxococcus stipitatus DSM 14675 | | 1 | 1 |
| No Yes | Burkholderia phenoliruptrix BR3459a | | 2 | 2 |
| No Yes | Pandoraea pnomenusa 3kgm | | 1 | 1 |
| No Yes | Ralstonia pickettii 12J | | 1 | 1 |
| No Yes | Ralstonia solanacearum FQY_4 | | 1 | 1 |
| No Yes | Ralstonia solanacearum Po82 | | 1 | 1 |
| No Yes | Ralstonia solanacearum PSI07 | | 1 | 1 |
| No Yes | Ralstonia solanacearum CMR15 | | 1 | 1 |
| No Yes | Ralstonia solanacearum GMI1000 | | 1 | 1 |
| No Yes | Burkholderia sp. YI23 | | 1 | 1 |
| No Yes | Burkholderia sp. CCGE1003 | | 2 | 2 |
| No Yes | Burkholderia sp. CCGE1001 | | 1 | 1 |
| No Yes | Burkholderia sp. KJ006 | | 1 | 1 |
| No Yes | Burkholderia thailandensis MSMB121 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei MSHR305 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei NCTC 13179 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei BPC006 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei 1026b | | 1 | 1 |
| No Yes | Burkholderia pseudomallei MSHR346 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei 668 | | 1 | 1 |
| No Yes | Burkholderia pseudomallei 1710b | | 1 | 1 |
| No Yes | Burkholderia pseudomallei K96243 | | 1 | 1 |
| No Yes | Burkholderia mallei NCTC 10229 | | 1 | 1 |
| No Yes | Burkholderia mallei NCTC 10247 | | 1 | 1 |
| No Yes | Burkholderia mallei ATCC 23344 | | 1 | 1 |
| No Yes | Burkholderia lata | | 1 | 1 |
| No Yes | Burkholderia ambifaria MC40-6 | | 1 | 1 |
| No Yes | Burkholderia cenocepacia MC0-3 | | 1 | 1 |
| No Yes | Burkholderia cenocepacia AU 1054 | | 1 | 1 |
| No Yes | Burkholderia cenocepacia J2315 | | 1 | 1 |
| No Yes | Burkholderia multivorans ATCC 17616 | | 1 | 1 |
| No Yes | Burkholderia cepacia GG4 | | 1 | 1 |
| No Yes | Variovorax paradoxus B4 | | 3 | 3 |
| No Yes | Variovorax paradoxus EPS | | 1 | 1 |
| No Yes | Bordetella pertussis CS | | 1 | 1 |
| No Yes | Bordetella parapertussis 18323 | | 1 | 1 |
| No Yes | Bordetella parapertussis Bpp5 | | 1 | 1 |
| No Yes | Bordetella bronchiseptica MO149 | | 1 | 1 |
| No Yes | Bordetella bronchiseptica 253 | | 1 | 1 |
| No Yes | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | | 1 | 1 |
| No Yes | Caulobacter crescentus CB15 | | 1 | 1 |
| No Yes | Phaeobacter gallaeciensis DSM 17395 | | 1 | 1 |
| No Yes | Phaeobacter gallaeciensis DSM 26640 | | 1 | 1 |
| No Yes | Leisingera methylohalidivorans DSM 14336 | | 1 | 1 |
| No Yes | Octadecabacter antarcticus 307 | | 1 | 1 |
| No Yes | Paracoccus aminophilus JCM 7686 | | 1 | 1 |
| No Yes | Micavibrio aeruginosavorus EPB | | 1 | 1 |
| No Yes | Rhizobium tropici CIAT 899 | | 1 | 1 |
| No Yes | Mesorhizobium australicum WSM2073 | | 1 | 1 |
| No Yes | Bradyrhizobium sp. S23321 | | 1 | 1 |
| No Yes | Bradyrhizobium sp. BTAi1 | | 1 | 1 |
| No Yes | Bradyrhizobium oligotrophicum S58 | | 1 | 1 |
| No Yes | Bradyrhizobium japonicum USDA 6 | | 1 | 1 |
| No Yes | Simiduia agarivorans SA1 = DSM 21679 | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Ionian Sea UM4b' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Ionian Sea UM7' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Ionian Sea U8' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Ionian Sea U7' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Ionian Sea U4' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Aegean Sea MED64' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'English Channel 615' | | 1 | 1 |
| No Yes | Alteromonas macleodii AltDE1 | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'English Channel 673' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Balearic Sea AD45' | | 1 | 1 |
| No Yes | Alteromonas macleodii str. 'Black Sea 11' | | 1 | 1 |
| No Yes | Stenotrophomonas maltophilia D457 | | 1 | 1 |
| No Yes | Stenotrophomonas maltophilia JV3 | | 1 | 1 |
| No Yes | Stenotrophomonas maltophilia R551-3 | | 1 | 1 |
| No Yes | Xanthomonas citri subsp. citri Aw12879 | | 1 | 1 |
| No Yes | Xanthomonas campestris pv. vesicatoria str. 85-10 | | 1 | 1 |
| No Yes | Xanthomonas axonopodis pv. citrumelo F1 | | 1 | 1 |
| No Yes | Xanthomonas axonopodis Xac29-1 | | 1 | 1 |
| No Yes | Xanthomonas oryzae pv. oryzicola BLS256 | | 1 | 1 |
| No Yes | Xanthomonas oryzae pv. oryzae MAFF 311018 | | 1 | 1 |
| No Yes | Xanthomonas oryzae pv. oryzae KACC 10331 | | 1 | 1 |
| No Yes | Xanthomonas campestris pv. raphani 756C | | 1 | 1 |
| No Yes | Xanthomonas campestris pv. campestris str. 8004 | | 1 | 1 |
| No Yes | Xanthomonas campestris pv. campestris str. ATCC 33913 | | 1 | 1 |
| No Yes | Serratia sp. AS13 | | 1 | 1 |
| No Yes | Serratia plymuthica S13 | | 1 | 1 |
| No Yes | Serratia plymuthica 4Rx13 | | 1 | 1 |
| No Yes | Serratia marcescens FGI94 | | 1 | 1 |
| No Yes | Serratia marcescens WW4 | | 1 | 1 |
| No Yes | Serratia liquefaciens ATCC 27592 | | 1 | 1 |
| No Yes | Pseudomonas protegens CHA0 | | 1 | 1 |
| No Yes | Pseudomonas fluorescens A506 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa SCV20265 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa MTB-1 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa LES431 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa RP73 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa B136-33 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa PA1R | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa PA1 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa DK2 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa NCGM2.S1 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa M18 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa LESB58 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa PA7 | | 1 | 1 |
| No Yes | Pseudomonas aeruginosa PAO1 | | 1 | 1 |
| No Yes | Drosophila melanogaster 69_5 | Fruit fly | 1 | 1 |
| No Yes | Caenorhabditis elegans 69_215 | Roundworm | 1 | 1 |
| No Yes | 2_050719S (meta-genome) | | 2 | 2 |
| No Yes | 4_050719Q (meta-genome) | | 3 | 3 |
| No Yes | Air microbial communities Singapore indoor air filters 1 (meta-genome) | | 5 | 5 |
| No Yes | Air microbial communities Singapore indoor air filters 2 (meta-genome) | | 7 | 7 |
| No Yes | Combined (meta-genome) | | 8 | 8 |
| No Yes | Cyphomyrmex longiscapus fungus garden (meta-genome) | | 2 | 2 |
| No Yes | Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) | | 2 | 2 |
| No Yes | Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) | | 3 | 3 |
| No Yes | Dump bottom (Dump bottom) (meta-genome) | | 27 | 27 |
| No Yes | Dump top (Dump top) (meta-genome) | | 16 | 16 |
| No Yes | Endophytic microbiome from Rice (meta-genome) | | 3 | 3 |
| No Yes | Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) | | 1 | 1 |
| No Yes | Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) | | 5 | 5 |
| No Yes | Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) | | 1 | 1 |
| No Yes | Freshwater propionate enrichment of Brocadia fulgida (meta-genome) | | 2 | 2 |
| No Yes | Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) | | 1 | 1 |
| No Yes | Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) | | 2 | 2 |
| No Yes | Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) | | 1 | 1 |
| No Yes | Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) | | 2 | 2 |
| No Yes | Marine anammox bioreactor enriched for Scalindua species (meta-genome) | | 1 | 1 |
| No Yes | Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) | | 9 | 9 |
| No Yes | Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) | | 1 | 1 |
| No Yes | Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) | | 5 | 5 |
| No Yes | Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) | | 2 | 2 |
| No Yes | Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) | | 1 | 1 |
| No Yes | Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) | | 1 | 1 |
| No Yes | Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) | | 2 | 2 |
| No Yes | NCBI 2017_08 genome | | 12639 | 12639 |
| No Yes | Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) | | 5 | 5 |
| No Yes | simHC - Simulated High Complexity Metagenome (meta-genome) | | 5 | 5 |
| No Yes | simLC - Simulated Low Complexity Metagenome (meta-genome) | | 2 | 2 |
| No Yes | simMC - Simulated Medium Complexity Metagenome (meta-genome) | | 5 | 5 |
| No Yes | Sludge/Australian, Phrap Assembly (meta-genome) | | 2 | 2 |
| No Yes | Sludge/US, Jazz Assembly (meta-genome) | | 1 | 1 |
| No Yes | Sludge/US, Phrap Assembly (meta-genome) | | 2 | 2 |
| No Yes | Soil microbial communities from Minnesota Farm (meta-genome) | | 5 | 5 |
| No Yes | Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) | | 3 | 3 |
| No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) | | 23 | 23 |
| No Yes | Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) | | 8 | 8 |
| No Yes | Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) | | 14 | 14 |
| No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) | | 6 | 6 |
| No Yes | Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) | | 7 | 7 |
| No Yes | STRING v9.0.5 (STRING) | | 158 | 158 |
| No Yes | Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) | | 8 | 8 |
| No Yes | Uniprot 2018_03 genome | | 4678 | 4678 |
| No Yes | Uranium Contaminated Groundwater FW106 (meta-genome) | | 2 | 2 |
| No Yes | Global Ocean Sampling Expedition (GOS) | | 126 | 126 |
| No Yes | NCBI plasmid sequences (Plasmids) | | 12 | 12 |
| No Yes | PDB chains (SCOP 1.75) (PDB) | | 2 | 2 |
| No Yes | SCOP2 SCOPe CATH ECOD (all domain sequ) | | 89 | 89 |
| No Yes | TargetDB (Targets) | | 24 | 24 |
