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Putative acetylxylan esterase-like family domain assignments


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View all assignments containing a Putative acetylxylan esterase-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   3381 3381
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 7 7
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 2
No Yes Gossypium raimondii v221   8 8
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   2 2
No Yes Arabidopsis lyrata Lyrate rockcress 2 2
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 5 5
No Yes Phaseolus vulgaris v186 French bean 3 3
No Yes Glycine max v109 Soybean 4 4
No Yes Cucumis sativus v122 Cucumber 8 8
No Yes Fragaria vesca Wild strawberry 3 3
No Yes Malus domestica v196 Apple 4 3
No Yes Prunus persica v139 Peach 3 3
No Yes Linum usitatissimum v200 Flax 6 6
No Yes Manihot esculenta v147 Cassava 5 5
No Yes Populus trichocarpa v156 Black cottonwood 6 6
No Yes Vitis vinifera Wine grape 3 3
No Yes Mimulus guttatus v140 Spotted monkey flower 6 6
No Yes Solanum lycopersicum v.2.3 Tomato 10 10
No Yes Solanum tuberosum Potato 13 13
No Yes Actinidia chinensis Hongyang   6 5
No Yes Aquilegia coerulea v195   6 6
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 9 9
No Yes Aegilops tauschii 22   2 2
No Yes Brachypodium distachyon Stiff brome 4 4
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   5 5
No Yes Oryza glumaepatula 22   4 4
No Yes Oryza glaberrima African rice 4 4
No Yes Oryza punctata 22   6 6
No Yes Oryza nivara 22   5 5
No Yes Oryza brachyantha 22 Malo sina 3 3
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 6 6
No Yes Oryza sativa v193 Rice 6 6
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 5 5
No Yes Panicum virgatum v202 Switchgrass 8 8
No Yes Setaria italica v164 Foxtail millet 7 7
No Yes Zea mays subsp. mays Maize 9 9
No Yes Zea mays v181 Maize 8 8
No Yes Sorghum bicolor Sorghum 5 5
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Chlorella vulgaris   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Clostridium difficile 630   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Fibrella aestuarina   1 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Spirosoma linguale DSM 74   1 1
No Yes Runella slithyformis DSM 19594   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Sphingobacterium sp. 21   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 3 3
No Yes Hordeum vulgare 22 Domesticated barley 3 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 4 4
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Lotus japonicus (Early assembly)   2 2
No Yes Malus x domestica (Duplicate) Apple 4 3
No Yes Ricinus communis (Early assembly) Castor bean 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   16 16
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 10 10
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 10 10
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Combined (meta-genome)   2 2
No Yes Human Gut Community Subject 7 (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1684 1682
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   46 46
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1072 1065
No Yes Global Ocean Sampling Expedition (GOS)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   10 10
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   38 38
No Yes TargetDB (Targets)   5 5

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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