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AGR C 984p-like family domain assignments


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View all assignments containing a AGR C 984p-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   5120 5120
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Rhodospirillum centenum SW   3 2
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Azorhizobium caulinodans ORS 571   3 3
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium radiotolerans JCM 2831   2 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   3 2
No Yes Sinorhizobium medicae WSM419   3 2
No Yes Sinorhizobium meliloti AK83   3 2
No Yes Genome sequence of Rhizobium sp. strain IRBG74   5 3
No Yes Rhizobium etli CIAT 652   2 1
No Yes Rhizobium leguminosarum bv. viciae 3841   4 2
No Yes Agrobacterium tumefaciens str. C58   5 3
No Yes Agrobacterium radiobacter K84   2 1
No Yes Agrobacterium sp. H13-3   5 3
No Yes Agrobacterium vitis S4   2 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   2 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   2 1
No Yes Hyphomicrobium denitrificans ATCC 51888   2 1
No Yes Rhodopseudomonas palustris BisA53   3 2
No Yes Bradyrhizobium japonicum USDA 110   3 2
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   3 2
No Yes Sinorhizobium fredii HH103   3 2
No Yes Sinorhizobium meliloti 2011   3 2
No Yes Sinorhizobium meliloti GR4   3 2
No Yes Sinorhizobium meliloti Rm41   3 2
No Yes Sinorhizobium meliloti SM11   3 2
No Yes Sinorhizobium meliloti BL225C   3 2
No Yes Sinorhizobium meliloti 1021   3 2
No Yes Rhizobium etli CFN 42   4 2
No Yes Rhizobium etli bv. mimosae str. Mim1   2 1
No Yes Rhizobium tropici CIAT 899   4 2
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   4 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   4 2
No Yes Liberibacter crescens BT-1   2 1
No Yes Candidatus Liberibacter americanus str. Sao Paulo   1 1
No Yes Mesorhizobium australicum WSM2073   2 1
No Yes Hyphomicrobium nitrativorans NL23   3 2
No Yes Hyphomicrobium denitrificans 1NES1   2 1
No Yes Rhodopseudomonas palustris BisB18   2 1
No Yes Bradyrhizobium sp. S23321   3 2
No Yes Bradyrhizobium japonicum USDA 6   3 2
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   3 3
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3070 2255
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   81 60
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1655 1188
No Yes Global Ocean Sampling Expedition (GOS)   5 5
No Yes NCBI plasmid sequences (Plasmids)   19 14
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   5 3

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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