SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Fatty acid binding protein-like domains


Fatty acid binding protein-like family domain assignments


No domain assignments for these genomes.

Add assignments from groups of genomes

View all assignments containing a Fatty acid binding protein-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]

Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   13140 13140
No Yes Homo sapiens 76_38 Human 34 34
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 17 17
No Yes Gorilla gorilla 76_3.1 Western gorilla 17 17
No Yes Pongo abelii 76_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 18 18
No Yes Papio anubis 76 Olive baboon 19 19
No Yes Macaca mulatta 76_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 20 20
No Yes Otolemur garnettii 76_3 Small-eared galago 16 16
No Yes Microcebus murinus 76_1 Gray mouse lemur 12 12
No Yes Rattus norvegicus 76_5.0 Norway rat 17 17
No Yes Mus musculus 76_38 House mouse 23 23
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 9 9
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 18 18
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 20 19
No Yes Cavia porcellus 76_3 Domestic guinea pig 16 16
No Yes Oryctolagus cuniculus 76_2 Rabbit 16 16
No Yes Ochotona princeps 76 American pika 14 14
No Yes Tupaia belangeri 76 Northern tree shrew 13 13
No Yes Sus scrofa 76_10.2 Pig 18 18
No Yes Bos taurus 76_3.1 Cattle 17 17
No Yes Ovis aries 76_3.1 Sheep 16 16
No Yes Vicugna pacos 76_1 Alpaca 8 8
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 13 13
No Yes Mustela putorius furo 76_1.0 Domestic ferret 17 17
No Yes Ailuropoda melanoleuca 76_1 Giant panda 17 17
No Yes Canis familiaris 76_3.1 Dog 21 21
No Yes Felis catus 76_6.2 Domestic cat 15 15
No Yes Equus caballus 76_2 Horse 15 15
No Yes Myotis lucifugus 76_2.0 Little brown bat 16 16
No Yes Pteropus vampyrus 76_1 Large flying fox 12 12
No Yes Sorex araneus 76_1 European shrew 9 9
No Yes Erinaceus europaeus 76 Western European hedgehog 10 10
No Yes Procavia capensis 76_1 Cape rock hyrax 10 10
No Yes Loxodonta africana 76_3 African savanna elephant 16 16
No Yes Echinops telfairi 76 Small Madagascar hedgehog 13 13
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 20 20
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 9 9
No Yes Macropus eugenii 76_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 13 13
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 16 16
No Yes Ornithorhynchus anatinus 76_5 Platypus 9 9
No Yes Petromyzon marinus 76_7.0 Sea lamprey 6 6
No Yes Meleagris gallopavo 76_2 Turkey 14 14
No Yes Gallus gallus 76_4 Chicken 15 15
No Yes Anas platyrhynchos 76_1.0 Mallard 15 15
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 12 12
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 15 15
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 20 20
No Yes Anolis carolinensis 76_2.0 Green anole 16 16
No Yes Xenopus laevis African clawed frog 31 31
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 14 14
No Yes Latimeria chalumnae 76_1 Coelacanth 16 16
No Yes Lepisosteus oculatus 76 Spotted gar 15 15
No Yes Gadus morhua 76_1 Atlantic cod 17 17
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 17 17
No Yes Takifugu rubripes 76_4 Torafugu 25 25
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 26 26
No Yes Oryzias latipes 76_1 Japanese medaka 25 25
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 22 22
No Yes Poecilia formosa 76 Amazon molly 22 22
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 19 19
No Yes Astyanax mexicanus 76 Mexican tetra 18 18
No Yes Danio rerio 76_9 Zebrafish 33 32
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 3 3
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 4 4
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 3 3
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 4 4
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   4 4
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 3 3
No Yes Caenorhabditis japonica   3 3
No Yes Caenorhabditis brenneri   8 8
No Yes Caenorhabditis remanei   5 5
No Yes Caenorhabditis elegans 76_235 Roundworm 5 5
No Yes Caenorhabditis briggsae 2   5 5
No Yes Trichinella spiralis 22   1 1
No Yes Hymenolepis microstoma   3 3
No Yes Echinococcus multilocularis   3 3
No Yes Echinococcus granulosus   4 4
No Yes Taenia solium Pork tapeworm 3 3
No Yes Schistosoma mansoni   4 4
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 32 32
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 5 5
No Yes Homo sapiens 75_37 (old version GRC) Human 31 31
No Yes Homo sapiens (NCBI version) Human 21 21
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 15 15
No Yes Heliconius numata (Incomplete)   3 3
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 16 16
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 16 16
No Yes Gorilla gorilla 69_3.1 Western gorilla 17 17
No Yes Pongo abelii 69_2 Sumatran orangutan 17 17
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 17 17
No Yes Macaca mulatta 69_1 Rhesus monkey 17 17
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 17 17
No Yes Otolemur garnettii 69_3 Small-eared galago 16 16
No Yes Microcebus murinus 69_1 Gray mouse lemur 12 12
No Yes Rattus norvegicus 69_3.4 Norway rat 15 15
No Yes Mus musculus 69_38 House mouse 16 16
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 9 9
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 18 18
No Yes Cavia porcellus 69_3 Domestic guinea pig 16 16
No Yes Oryctolagus cuniculus 69_2 Rabbit 15 15
No Yes Ochotona princeps 69 American pika 14 14
No Yes Tupaia belangeri 69 Northern tree shrew 13 13
No Yes Sus scrofa 69_10.2 Pig 16 16
No Yes Bos taurus 69_3.1 Cattle 16 16
No Yes Vicugna pacos 69_1 Alpaca 8 8
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 13 13
No Yes Mustela putorius furo 69_1.0 Domestic ferret 17 17
No Yes Ailuropoda melanoleuca 69_1 Giant panda 17 17
No Yes Canis familiaris 69_3.1 Dog 20 20
No Yes Felis catus 69 Domestic cat 8 8
No Yes Equus caballus 69_2 Horse 15 15
No Yes Myotis lucifugus 69_2.0 Little brown bat 14 14
No Yes Pteropus vampyrus 69_1 Large flying fox 12 12
No Yes Sorex araneus 69_1 European shrew 9 9
No Yes Erinaceus europaeus 69 Western European hedgehog 10 10
No Yes Procavia capensis 69_1 Cape rock hyrax 10 10
No Yes Loxodonta africana 69_3 African savanna elephant 15 15
No Yes Echinops telfairi 69 Small Madagascar hedgehog 13 13
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 11 11
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 9 9
No Yes Macropus eugenii 69_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 12 12
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 16 16
No Yes Ornithorhynchus anatinus 69_5 Platypus 8 8
No Yes Petromyzon marinus 69_7.0 Sea lamprey 6 6
No Yes Meleagris gallopavo 69_2 Turkey 13 13
No Yes Gallus gallus 69_2 Chicken 14 14
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 12 12
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 18 18
No Yes Anolis carolinensis 69_2.0 Green anole 14 14
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 14 14
No Yes Latimeria chalumnae 69_1 Coelacanth 15 15
No Yes Gadus morhua 69_1 Atlantic cod 17 17
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 16 16
No Yes Takifugu rubripes 69_4 Torafugu 22 22
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 17 17
No Yes Oryzias latipes 69_1 Japanese medaka 22 22
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 22 22
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 19 19
No Yes Danio rerio 69_9 Zebrafish 24 23
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 4 4
No Yes NCBI 2017_08 genome   4849 4836
No Yes STRING v9.0.5 (STRING)   431 431
No Yes Uniprot 2018_03 genome   3398 3376
No Yes PDB chains (SCOP 1.75) (PDB)   42 42
No Yes Protein Data Bank (all PDB sequenc)   314 314
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1116 1116
No Yes TargetDB (Targets)   5 5

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.