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Bacterial luciferase (alkanal monooxygenase) family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   1423 1423
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Aliivibrio salmonicida LFI1238   2 2
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio harveyi ATCC BAA-1116   2 2
No Yes Shewanella woodyi ATCC 51908   2 2
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   2 2
No Yes Streptomyces collinus Tu 365   1 1
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 2
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   3 3
No Yes NCBI 2017_08 genome   599 599
No Yes STRING v9.0.5 (STRING)   17 17
No Yes Uniprot 2018_03 genome   690 690
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   18 18
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   42 42

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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