SUPERFAMILY 1.75 HMM library and genome assignments server

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DNA-binding domain of REP protein family domain assignments


No domain assignments for these genomes.

Add assignments from groups of genomes

View all assignments containing a DNA-binding domain of REP protein domain in each group of genomes.

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Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   7861 7861
No Yes Malus domestica v196 Apple 1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes NCBI 2017_08 genome   369 369
No Yes Uniprot 2018_03 genome   5450 5450
No Yes NCBI viral sequences (Viral)   317 317
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes UniProt viral sequences (Viral)   1713 1713

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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