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Domain combinations for 53474,49785 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53474 - alpha/beta-Hydrolases
49785 - Galactose-binding domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Capitella_sp._I_ 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   2
Sporisorium_reilianum_22 0
Rhodotorula_graminis_WP1_v1.0 0
Microbotryum_violaceum_22 0
Sphaerobolus_stellatus_v1.0 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Magnaporthe_poae_ATCC_64411_22 0
Magnaporthe_grisea_70-15_ 0
Podospora_anserina_ 0
Sporotrichum_thermophile_ATCC_42464_ 1
Thielavia_terrestris_NRRL_8126_ 1
Chaetomium_globosum_CBS_148.51_ 1
Neurospora_tetrasperma_ 0
Neurospora_discreta_FGSC_8579_ 0
Neurospora_crassa_OR74A_ 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1
Verticillium_albo-atrum_VaMs.102_ 0
Verticillium_dahliae_VdLs.17_ 0
Glomerella_graminicola_22 0
Fusarium_graminearum_ 0
Nectria_haematococca_mpVI_ 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3
Fusarium_verticillioides_7600_ 1
Trichoderma_asperellum_CBS_433.97_v1.0 0
Trichoderma_atroviride_ 0
Trichoderma_virens_Gv29-8_ 1
Trichoderma_harzianum_CBS_226.95_v1.0 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   0
Botrytis_cinerea_B05.10_ 0
Sclerotinia_sclerotiorum_ 0
Didymella_exigua_CBS_183.55_v1.0 0
Setosphaeria_turcica_v1.0 0
Cochliobolus_miyabeanus_ATCC_44560_v1.0 0
Cochliobolus_victoriae_FI3_v1.0 0
Cochliobolus_carbonum_26-R-13_v1.0 0
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1
Cochliobolus_lunatus_m118_v2.0 0
Pyrenophora_teres_f._teres_22 1
Pyrenophora_tritici-repentis_ 1
Stagonospora_nodorum_ 1
Mycosphaerella_graminicola_IPO323_ 0
Zasmidium_cellare_ATCC_36951_v1.0 1
Dothistroma_septosporum 0
Septoria_musiva_v1.0 0
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 0
Aspergillus_zonatus_v1.0 0
Penicillium_chrysogenum_Wisconsin_54-1255_ 0
Penicillium_chrysogenum_v1.0 0
Aspergillus_acidus_v1.0 1
Aspergillus_fumigatus_Af293 0
Aspergillus_brasiliensis_v1.0 1
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_versicolor_v1.0 1
Aspergillus_glaucus 0
Aspergillus_carbonarius_ITEM_5010_ 0
Neosartorya_fischeri_NRRL_181_ 0
Aspergillus_terreus_NIH2624_ 0
Aspergillus_tubingensis_v1.0 0
Aspergillus_wentii_v1.0 0
Aspergillus_oryzae_RIB40_ 0
Aspergillus_niger_22 0
Aspergillus_niger_ATCC_1015_ 1
Aspergillus_flavus_NRRL3357_ 1
Penicillium_marneffei_ATCC_18224_ 0
Hansenula_polymorpha_v2.0 0
Dekkera_bruxellensis_CBS_2499_v2.0 0
Pichia_membranifaciensv1.0 0
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Chlorella_vulgaris_ 0
Thecamonas_trahens_ATCC_50062_ 1
Leishmania_mexicana_2.4 0
Leishmania_major_strain_Friedlin_ 0
Leishmania_infantum_JPCM5_2.4 0
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 0
Trypanosoma_cruzi_strain_CL_Brener 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_ultimum_v1.7-2 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Ichthyophthirius_multifiliis_strain_G5_ 1
Naegleria_gruberi_ 1
Synechococcus_sp._PCC_7502 1
Synechococcus_sp._CC9311 2
Prochlorococcus_marinus_str._MIT_9515 1
Halothece_sp._PCC_7418 0
Conexibacter_woesei_DSM_14684 2
Eggerthella_sp._YY7918 0
Slackia_heliotrinireducens_DSM_20476 0
Olsenella_uli_DSM_7084 0
Coriobacterium_glomerans_PW2 1
Nakamurella_multipartita_DSM_44233 1
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 0
Catenulispora_acidiphila_DSM_44928 2
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 3
Frankia_alni_ACN14a 1
Thermobifida_fusca_YX 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1
Thermomonospora_curvata_DSM_43183 4
Streptosporangium_roseum_DSM_43021 2
Streptomyces_coelicolor_A3(2) 1
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 2
Streptomyces_avermitilis_MA-4680 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_scabiei_87.22 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1
Actinosynnema_mirum_DSM_43827 2
Saccharomonospora_viridis_DSM_43017 2
Pseudonocardia_dioxanivorans_CB1190 3
Saccharopolyspora_erythraea_NRRL_2338 3
Amycolatopsis_mediterranei_U32 5
Kribbella_flavida_DSM_17836 0
Microlunatus_phosphovorus_NM-1 1
Salinispora_arenicola_CNS-205 1
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 1
Micromonospora_aurantiaca_ATCC_27029 1
Actinoplanes_sp._N902-109 1
Actinoplanes_sp._SE50/110 2
Actinoplanes_missouriensis_431 2
Segniliparus_rotundus_DSM_44985 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 0
Rhodococcus_jostii_RHA1 0
Rhodococcus_opacus_B4 0
Rhodococcus_erythropolis_PR4 1
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 0
Mycobacterium_massiliense_str._GO_06 1
Mycobacterium_abscessus_ATCC_19977 1
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 1
Mycobacterium_avium_104 1
Mycobacterium_vanbaalenii_PYR-1 1
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_rhodesiae_NBB3 2
Mycobacterium_ulcerans_Agy99 2
Mycobacterium_gilvum_PYR-GCK 1
Mycobacterium_chubuense_NBB4 2
Mycobacterium_marinum_M 2
Mycobacterium_smegmatis_str._MC2_155 1
Microbacterium_testaceum_StLB037 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Intrasporangium_calvum_DSM_43043 0
Isoptericola_variabilis_225 1
Arthrobacter_chlorophenolicus_A6 0
Renibacterium_salmoninarum_ATCC_33209 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1
Chloroflexus_sp._MS-G 1
Chloroflexus_sp._Y-400-fl 1
Chloroflexus_aggregans_DSM_9485 1
Chloroflexus_aurantiacus_J-10-fl 1
Clostridium_clariflavum_DSM_19732 0
Clostridium_cellulolyticum_H10 0
Clostridium_thermocellum_ATCC_27405 0
Sulfobacillus_acidophilus_DSM_10332 1
Clostridium_sp._BNL1100 0
Oenococcus_oeni_PSU-1 0
Leuconostoc_sp._C2 0
Leuconostoc_kimchii_IMSNU_11154 0
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293 0
Leuconostoc_gasicomitatum_LMG_18811 0
Lactobacillus_casei_ATCC_334 0
Lactobacillus_kefiranofaciens_ZW3 0
Lactobacillus_crispatus_ST1 0
Lactobacillus_rhamnosus_Lc_705 0
Lactobacillus_johnsonii_FI9785 0
Lactobacillus_sanfranciscensis_TMW_1.1304 0
Lactobacillus_salivarius_CECT_5713 0
Lactobacillus_fermentum_IFO_3956 0
Lactobacillus_amylovorus_GRL1118 0
Lactobacillus_sakei_subsp._sakei_23K 0
Lactobacillus_reuteri_DSM_20016 0
Lactobacillus_gasseri_ATCC_33323 0
Lactobacillus_helveticus_DPC_4571 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 0
Lactobacillus_buchneri_NRRL_B-30929 0
Lactobacillus_buchneri 0
Lactobacillus_brevis_ATCC_367 0
Lactobacillus_acidophilus_30SC 0
Pediococcus_pentosaceus_ATCC_25745 0
Lactococcus_garvieae_ATCC_49156 0
Lactococcus_lactis_subsp._cremoris_MG1363 0
Streptococcus_sp._I-P16 0
Streptococcus_sp._I-G2 0
Streptococcus_intermedius_JTH08 0
Streptococcus_gallolyticus_UCN34 0
Streptococcus_pseudopneumoniae_IS7493 0
Streptococcus_pasteurianus_ATCC_43144 0
Streptococcus_equi_subsp._equi_4047 0
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 0
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Streptococcus_macedonicus_ACA-DC_198 0
Streptococcus_mitis_B6 0
Streptococcus_uberis_0140J 0
Streptococcus_parauberis_KCTC_11537 0
Streptococcus_parasanguinis_ATCC_15912 0
Streptococcus_pyogenes_str._Manfredo 0
Streptococcus_pneumoniae_P1031 0
Streptococcus_agalactiae_A909 0
Streptococcus_mutans_NN2025 0
Streptococcus_thermophilus_LMD-9 0
Streptococcus_suis_P1/7 0
Streptococcus_sanguinis_SK36 0
Streptococcus_salivarius_57.I 0
Streptococcus_oralis_Uo5 0
Streptococcus_gordonii_str._Challis_substr._CH1 0
Brevibacillus_brevis_NBRC_100599 0
Paenibacillus_sp._JDR-2 0
Paenibacillus_terrae_HPL-003 0
Bacillus_selenitireducens_MLS10 0
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 0
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 0
Listeria_ivanovii_subsp._ivanovii_PAM_55 0
Bacillus_weihenstephanensis_KBAB4 1
Bacillus_thuringiensis_str._Al_Hakam 0
Bacillus_cereus_03BB102 1
Bacillus_anthracis_str._A0248 1
Staphylococcus_lugdunensis_HKU09-01 0
Staphylococcus_carnosus_subsp._carnosus_TM300 0
Staphylococcus_aureus_subsp._aureus_JH1 0
Staphylococcus_aureus 0
Gemmatimonas_aurantiaca_T-27 0
Cyclobacterium_marinum_DSM_745 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 1
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Muricauda_ruestringensis_DSM_13258 1
Cellulophaga_lytica_DSM_7489 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Waddlia_chondrophila_WSU_86-1044 1
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 1
Rhodopirellula_baltica_SH_1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1
Treponema_brennaborense_DSM_12168 0
Candidatus_Koribacter_versatilis_Ellin345 0
Campylobacter_jejuni_subsp._doylei_269.97 0
Syntrophobacter_fumaroxidans_MPOB 0
Desulfohalobium_retbaense_DSM_5692 0
Haliangium_ochraceum_DSM_14365 1
Stigmatella_aurantiaca_DW4/3-1 1
Burkholderia_xenovorans_LB400 0
Ralstonia_eutropha_JMP134 0
Cupriavidus_taiwanensis_LMG_19424 0
Cupriavidus_necator_N-1 0
Ralstonia_pickettii_12D 0
Burkholderia_thailandensis_E264 1
Burkholderia_pseudomallei_1106a 2
Burkholderia_ambifaria_AMMD 0
Burkholderia_cenocepacia_HI2424 0
Burkholderia_vietnamiensis_G4 0
Burkholderia_gladioli_BSR3 0
Verminephrobacter_eiseniae_EF01-2 0
Delftia_sp._Cs1-4 0
Delftia_acidovorans_SPH-1 0
Variovorax_paradoxus_S110 0
Collimonas_fungivorans_Ter331 1
Bordetella_petrii_DSM_12804 0
Brevundimonas_subvibrioides_ATCC_15264 1
Caulobacter_segnis_ATCC_21756 1
Novosphingobium_sp._PP1Y 2
Sphingobium_sp._SYK-6 0
Sphingomonas_wittichii_RW1 0
Phaeobacter_gallaeciensis_2.10 0
Jannaschia_sp._CCS1 0
Ruegeria_sp._TM1040 0
Ruegeria_pomeroyi_DSS-3 0
Ketogulonicigenium_vulgare_Y25 0
Ketogulonigenium_vulgarum_WSH-001 0
Roseobacter_litoralis_Och_149 0
Roseobacter_denitrificans_OCh_114 0
Rhodobacter_sphaeroides_ATCC_17029 0
Azospirillum_lipoferum_4B 1
Azorhizobium_caulinodans_ORS_571 1
Ochrobactrum_anthropi_ATCC_49188 0
Sinorhizobium_fredii_NGR234 0
Sinorhizobium_medicae_WSM419 0
Sinorhizobium_meliloti_AK83 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_radiobacter_K84 0
Agrobacterium_sp._H13-3 0
Agrobacterium_vitis_S4 0
Mesorhizobium_opportunistum_WSM2075 0
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 0
Mesorhizobium_loti_MAFF303099 0
Beijerinckia_indica_subsp._indica_ATCC_9039 0
Methylocystis_sp._SC2 1
Oceanimonas_sp._GK1 0
Aliivibrio_salmonicida_LFI1238 0
Shewanella_sediminis_HAW-EB3 0
Shewanella_frigidimarina_NCIMB_400 0
Pseudoalteromonas_atlantica_T6c 1
Marinobacter_adhaerens_HP15 0
Hahella_chejuensis_KCTC_2396 1
Chromohalobacter_salexigens_DSM_3043 0
Halomonas_elongata_DSM_2581 0
Stenotrophomonas_maltophilia_K279a 1
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_campestris_pv._campestris_str._B100 1
Spiribacter_sp._UAH-SP71 0
Alkalilimnicola_ehrlichii_MLHE-1 0
Halorhodospira_halophila_SL1 0
Nitrosococcus_watsonii_C-113 0
Nitrosococcus_halophilus_Nc4 0
Nitrosococcus_oceani_ATCC_19707 0
Rahnella_sp._Y9602 0
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 0
Pantoea_sp._At-9b 0
Pseudomonas_fluorescens_SBW25 0
Caldivirga_maquilingensis_IC-167 1
Methanohalophilus_mahii_DSM_5219 0
Natrialba_magadii_ATCC_43099 0
Natronomonas_pharaonis_DSM_2160 1

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Strains
Genome     Number
Aspergillus_fumigatus_A1163_ 0
Synechococcus_sp._CC9902 1
Synechococcus_sp._RCC307 1
Synechococcus_sp._CC9605 1
Synechococcus_sp._WH_8102 1
Synechococcus_sp._WH_7803 1
Prochlorococcus_marinus_str._NATL1A 1
Prochlorococcus_marinus_str._MIT_9301 1
Prochlorococcus_marinus_str._AS9601 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1
Prochlorococcus_marinus_str._MIT_9215 1
Prochlorococcus_marinus_str._MIT_9211 1
Prochlorococcus_marinus_str._MIT_9313 1
Prochlorococcus_marinus_str._MIT_9312 1
Prochlorococcus_marinus_str._MIT_9303 1
Prochlorococcus_marinus_str._NATL2A 1
Cyanothece_sp._PCC_7822 1
Gordonibacter_pamelaeae_7-10-1-b 0
Frankia_sp._EuI1c 6
Nocardiopsis_alba_ATCC_BAA-2165 1
Streptomyces_albus_J1074 3
Streptomyces_rapamycinicus_NRRL_5491 1
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 1
Streptomyces_venezuelae_ATCC_10712 1
Streptomyces_collinus_Tu_365 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 3
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1
Saccharothrix_espanaensis_DSM_44229 5
Amycolatopsis_mediterranei_RB 5
Amycolatopsis_mediterranei_S699 5
Amycolatopsis_mediterranei_S699 5
Amycolatopsis_orientalis_HCCB10007 3
Actinoplanes_friuliensis_DSM_7358 3
Rhodococcus_pyridinivorans_SB3094 0
Rhodococcus_erythropolis_CCM2595 1
Nocardia_brasiliensis_ATCC_700358 3
Mycobacterium_sp._MOTT36Y 1
Mycobacterium_sp._JDM601 1
Mycobacterium_abscessus_subsp._bolletii_50594 1
Mycobacterium_liflandii_128FXT 2
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 1
Mycobacterium_intracellulare_MOTT-64 1
Mycobacterium_indicus_pranii_MTCC_9506 1
Mycobacterium_intracellulare_MOTT-02 1
Mycobacterium_avium_subsp._paratuberculosis_MAP4 1
Mycobacterium_avium_subsp._paratuberculosis_K-10 1
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_CAS/NITR204 2
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB423 1
Mycobacterium_tuberculosis_RGTB327 0
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_tuberculosis_CDC1551 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Mycobacterium_gilvum_Spyr1 1
Mycobacterium_smegmatis_str._MC2_155 1
Mycobacterium_kansasii_ATCC_12478 2
Corynebacterium_maris_DSM_45190 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1
Corynebacterium_glutamicum_SCgG2 1
Corynebacterium_glutamicum_SCgG1 1
Clavibacter_michiganensis_subsp._sepedonicus 0
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 0
Bifidobacterium_longum_DJO10A 1
Bifidobacterium_longum_subsp._infantis_157F 1
Bifidobacterium_longum_subsp._longum_KACC_91563 1
Clostridium_thermocellum_DSM_1313 0
Faecalibacterium_prausnitzii_L2-6 1
Sulfobacillus_acidophilus_TPY 1
Clostridium_saccharobutylicum_DSM_13864 0
Leuconostoc_carnosum_JB16 0
Leuconostoc_mesenteroides_subsp._mesenteroides_J18 0
Leuconostoc_gelidum_JB7 0
Lactobacillus_paracasei_subsp._paracasei_8700:2 0
Lactobacillus_casei_LOCK919 0
Lactobacillus_casei_W56 0
Lactobacillus_casei_LC2W 0
Lactobacillus_casei_BD-II 0
Lactobacillus_casei_BL23 0
Lactobacillus_casei_str._Zhang 0
Lactobacillus_rhamnosus_LOCK908 0
Lactobacillus_rhamnosus_LOCK900 0
Lactobacillus_rhamnosus_ATCC_8530 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_rhamnosus_GG 0
Lactobacillus_johnsonii_N6.2 0
Lactobacillus_johnsonii_DPC_6026 0
Lactobacillus_johnsonii_NCC_533 0
Lactobacillus_salivarius_UCC118 0
Lactobacillus_fermentum_F-6 0
Lactobacillus_fermentum_CECT_5716 0
Lactobacillus_amylovorus_GRL_1112 0
Lactobacillus_reuteri_TD1 0
Lactobacillus_reuteri_I5007 0
Lactobacillus_reuteri_JCM_1112 0
Lactobacillus_reuteri_SD2112 0
Lactobacillus_helveticus_R0052 0
Lactobacillus_helveticus_H10 0
Lactobacillus_helveticus_CNRZ32 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 0
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 0
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 0
Lactobacillus_brevis_KB290 0
Lactobacillus_acidophilus_La-14 0
Lactobacillus_acidophilus_NCFM 0
Lactococcus_garvieae_Lg2 0
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 0
Lactococcus_lactis_subsp._lactis_IO-1 0
Lactococcus_lactis_subsp._lactis_CV56 0
Lactococcus_lactis_subsp._lactis_KF147 0
Lactococcus_lactis_subsp._lactis_Il1403 0
Lactococcus_lactis_subsp._cremoris_KW2 0
Lactococcus_lactis_subsp._cremoris_UC509.9 0
Lactococcus_lactis_subsp._cremoris_A76 0
Lactococcus_lactis_subsp._cremoris_NZ9000 0
Lactococcus_lactis_subsp._cremoris_SK11 0
Streptococcus_constellatus_subsp._pharyngis_C1050 0
Streptococcus_constellatus_subsp._pharyngis_C818 0
Streptococcus_constellatus_subsp._pharyngis_C232 0
Streptococcus_intermedius_B196 0
Streptococcus_intermedius_C270 0
Streptococcus_anginosus_C238 0
Streptococcus_anginosus_C1051 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 0
Streptococcus_lutetiensis_033 0
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 0
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 0
Streptococcus_equi_subsp._zooepidemicus 0
Streptococcus_dysgalactiae_subsp._equisimilis_167 0
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 0
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 0
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 0
Streptococcus_oligofermentans_AS_1.3089 0
Streptococcus_iniae_SF1 0
Streptococcus_parasanguinis_FW213 0
Streptococcus_pyogenes_HSC5 0
Streptococcus_pyogenes_A20 0
Streptococcus_pyogenes_MGAS1882 0
Streptococcus_pyogenes_MGAS15252 0
Streptococcus_pyogenes_Alab49 0
Streptococcus_pyogenes_MGAS10750 0
Streptococcus_pyogenes_MGAS10270 0
Streptococcus_pyogenes_MGAS2096 0
Streptococcus_pyogenes_MGAS9429 0
Streptococcus_pyogenes_MGAS6180 0
Streptococcus_pyogenes_NZ131 0
Streptococcus_pyogenes_MGAS8232 0
Streptococcus_pyogenes_MGAS10394 0
Streptococcus_pyogenes_MGAS315 0
Streptococcus_pyogenes_SSI-1 0
Streptococcus_pyogenes_M1_476 0
Streptococcus_pyogenes_MGAS5005 0
Streptococcus_pyogenes_M1_GAS 0
Streptococcus_pneumoniae_A026 0
Streptococcus_pneumoniae_ST556 0
Streptococcus_pneumoniae_SPNA45 0
Streptococcus_pneumoniae_SPN994039 0
Streptococcus_pneumoniae_SPN994038 0
Streptococcus_pneumoniae_SPN034183 0
Streptococcus_pneumoniae_SPN034156 0
Streptococcus_pneumoniae_INV104 0
Streptococcus_pneumoniae_INV200 0
Streptococcus_pneumoniae_OXC141 0
Streptococcus_pneumoniae_gamPNI0373 0
Streptococcus_pneumoniae_AP200 0
Streptococcus_pneumoniae_ATCC_700669 0
Streptococcus_pneumoniae_TCH8431/19A 0
Streptococcus_pneumoniae_CGSP14 0
Streptococcus_pneumoniae_G54 0
Streptococcus_pneumoniae_JJA 0
Streptococcus_pneumoniae_70585 1
Streptococcus_pneumoniae_Hungary19A-6 0
Streptococcus_pneumoniae_Taiwan19F-14 0
Streptococcus_pneumoniae_D39 0
Streptococcus_pneumoniae_670-6B 0
Streptococcus_pneumoniae_R6 0
Streptococcus_pneumoniae_TIGR4 1
Streptococcus_agalactiae_ILRI112 0
Streptococcus_agalactiae_ILRI005 0
Streptococcus_agalactiae_09mas018883 0
Streptococcus_agalactiae_2-22 0
Streptococcus_agalactiae_GD201008-001 0
Streptococcus_agalactiae_NEM316 0
Streptococcus_agalactiae_2603V/R 0
Streptococcus_mutans_GS-5 0
Streptococcus_mutans_LJ23 0
Streptococcus_mutans_UA159 0
Streptococcus_thermophilus_MN-ZLW-002 0
Streptococcus_thermophilus_JIM_8232 0
Streptococcus_thermophilus_ND03 0
Streptococcus_thermophilus_CNRZ1066 0
Streptococcus_thermophilus_LMG_18311 0
Streptococcus_suis_T15 0
Streptococcus_suis_TL13 0
Streptococcus_suis_SC070731 0
Streptococcus_suis_S735 0
Streptococcus_suis_ST3 0
Streptococcus_suis_SS12 0
Streptococcus_suis_D12 0
Streptococcus_suis_ST1 0
Streptococcus_suis_A7 0
Streptococcus_suis_JS14 0
Streptococcus_suis_BM407 0
Streptococcus_suis_SC84 0
Streptococcus_suis_GZ1 0
Streptococcus_suis_98HAH33 0
Streptococcus_suis_05ZYH33 0
Streptococcus_salivarius_CCHSS3 0
Streptococcus_salivarius_JIM8777 0
Paenibacillus_polymyxa_CR1 0
Paenibacillus_polymyxa_E681 0
Listeria_monocytogenes_EGD_sequence 0
Listeria_monocytogenes_serotype_4b_str._LL195 0
Listeria_monocytogenes_07PF0776 0
Listeria_monocytogenes_J1-220 0
Listeria_monocytogenes_J1816 0
Listeria_monocytogenes_SLCC5850 0
Listeria_monocytogenes_ATCC_19117 0
Listeria_monocytogenes_L312 0
Listeria_monocytogenes_SLCC2479 0
Listeria_monocytogenes_SLCC7179 0
Listeria_monocytogenes_SLCC2540 0
Listeria_monocytogenes_SLCC2378 0
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 0
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 0
Listeria_monocytogenes_serotype_7_str._SLCC2482 0
Listeria_monocytogenes_08-5578 0
Listeria_monocytogenes_08-5923 0
Listeria_monocytogenes_10403S 0
Listeria_monocytogenes_J0161 0
Listeria_monocytogenes_Finland_1998 0
Listeria_monocytogenes_FSL_R2-561 0
Listeria_monocytogenes_serotype_4b_str._F2365 0
Listeria_monocytogenes_EGD-e 0
Bacillus_toyonensis_BCT-7112 1
Bacillus_thuringiensis_HD-771 1
Bacillus_thuringiensis_HD-789 1
Bacillus_thuringiensis_MC28 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1
Bacillus_thuringiensis_YBT-1518 1
Bacillus_thuringiensis_Bt407 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1
Bacillus_thuringiensis_BMB171 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1
Bacillus_cereus_FRI-35 1
Bacillus_cereus_biovar_anthracis_str._CI 1
Bacillus_cereus_AH820 1
Bacillus_cereus_AH187 1
Bacillus_cereus_B4264 1
Bacillus_cereus_Q1 1
Bacillus_cereus_F837/76 1
Bacillus_cereus_NC7401 1
Bacillus_cereus_E33L 1
Bacillus_cereus_ATCC_14579 1
Bacillus_cereus_ATCC_10987 1
Bacillus_anthracis_str._H9401 0
Bacillus_anthracis_str._CDC_684 1
Bacillus_anthracis_str._'Ames_Ancestor' 1
Bacillus_anthracis_str._Sterne 1
Bacillus_anthracis_str._Ames 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 0
Staphylococcus_pasteuri_SP1 0
Staphylococcus_lugdunensis_N920143 0
Staphylococcus_warneri_SG1 0
Staphylococcus_aureus_CA-347 0
Staphylococcus_aureus_Bmb9393 0
Staphylococcus_aureus_M1 0
Staphylococcus_aureus_08BA02176 0
Staphylococcus_aureus_ST228/18412 0
Staphylococcus_aureus_ST228/18341 0
Staphylococcus_aureus_ST228/16125 0
Staphylococcus_aureus_ST228/16035 0
Staphylococcus_aureus_ST228/15532 0
Staphylococcus_aureus_ST228/10497 0
Staphylococcus_aureus_ST228/10388 0
Staphylococcus_aureus_04-02981 0
Staphylococcus_aureus_RF122 0
Staphylococcus_aureus_subsp._aureus_Z172 0
Staphylococcus_aureus_subsp._aureus_6850 0
Staphylococcus_aureus_subsp._aureus_SA957 0
Staphylococcus_aureus_subsp._aureus_CN1 0
Staphylococcus_aureus_subsp._aureus_SA40 0
Staphylococcus_aureus_subsp._aureus_11819-97 0
Staphylococcus_aureus_subsp._aureus_M013 0
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 0
Staphylococcus_aureus_subsp._aureus_VC40 0
Staphylococcus_aureus_subsp._aureus_T0131 0
Staphylococcus_aureus_subsp._aureus_LGA251 0
Staphylococcus_aureus_subsp._aureus_ECT-R_2 0
Staphylococcus_aureus_subsp._aureus_JKD6159 0
Staphylococcus_aureus_subsp._aureus_ED133 0
Staphylococcus_aureus_subsp._aureus_ED98 0
Staphylococcus_aureus_subsp._aureus_TW20 0
Staphylococcus_aureus_subsp._aureus_55/2053 0
Staphylococcus_aureus_subsp._aureus_TCH60 0
Staphylococcus_aureus_subsp._aureus_str._JKD6008 0
Staphylococcus_aureus_subsp._aureus_71193 0
Staphylococcus_aureus_subsp._aureus_S0385 0
Staphylococcus_aureus_subsp._aureus_str._Newman 0
Staphylococcus_aureus_subsp._aureus_Mu3 0
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 0
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 0
Staphylococcus_aureus_subsp._aureus_JH9 0
Staphylococcus_aureus_subsp._aureus_MSSA476 0
Staphylococcus_aureus_subsp._aureus_MRSA252 0
Staphylococcus_aureus_subsp._aureus_MW2 0
Staphylococcus_aureus_subsp._aureus_N315 0
Staphylococcus_aureus_subsp._aureus_Mu50 0
Staphylococcus_aureus_subsp._aureus_COL 0
Staphylococcus_aureus_subsp._aureus_NCTC_8325 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Singulisphaera_acidiphila_DSM_18658 0
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 0
Campylobacter_jejuni_subsp._jejuni_81-176 0
Myxococcus_stipitatus_DSM_14675 0
Ralstonia_pickettii_12J 0
Burkholderia_sp._YI23 1
Burkholderia_sp._KJ006 0
Burkholderia_thailandensis_MSMB121 1
Burkholderia_pseudomallei_MSHR305 2
Burkholderia_pseudomallei_NCTC_13179 2
Burkholderia_pseudomallei_BPC006 2
Burkholderia_pseudomallei_1026b 1
Burkholderia_pseudomallei_668 1
Burkholderia_pseudomallei_1710b 1
Burkholderia_pseudomallei_K96243 1
Burkholderia_mallei_NCTC_10229 1
Burkholderia_mallei_NCTC_10247 1
Burkholderia_lata 0
Burkholderia_ambifaria_MC40-6 0
Burkholderia_cenocepacia_MC0-3 0
Burkholderia_cenocepacia_AU_1054 0
Burkholderia_cenocepacia_J2315 0
Burkholderia_cepacia_GG4 0
Variovorax_paradoxus_B4 0
Phaeobacter_gallaeciensis_DSM_17395 0
Phaeobacter_gallaeciensis_DSM_26640 0
Leisingera_methylohalidivorans_DSM_14336 0
Rhodobacter_sphaeroides_KD131 0
Rhodobacter_sphaeroides_2.4.1 0
Paracoccus_aminophilus_JCM_7686 0
Sinorhizobium_fredii_USDA_257 0
Sinorhizobium_fredii_HH103 0
Sinorhizobium_meliloti_2011 0
Sinorhizobium_meliloti_GR4 0
Sinorhizobium_meliloti_Rm41 0
Sinorhizobium_meliloti_SM11 0
Sinorhizobium_meliloti_BL225C 0
Sinorhizobium_meliloti_1021 0
Rhizobium_etli_CFN_42 0
Rhizobium_etli_bv._mimosae_str._Mim1 0
Rhizobium_tropici_CIAT_899 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Mesorhizobium_australicum_WSM2073 0
Rhodopseudomonas_palustris_HaA2 0
Simiduia_agarivorans_SA1_=_DSM_21679 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Spiribacter_salinus_M19-40 0
Thioalkalivibrio_nitratireducens_DSM_14787 0
Rahnella_aquatilis_HX2 0
Enterobacter_cloacae_SCF1 0
Pseudomonas_poae_RE*1-1-14 0
Natronococcus_occultus_SP4 1

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Others
Genome     Number
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 8
PDB_chains_(SCOP_1.75)_(PDB) 0
TargetDB__(Targets) 4
Protein_Data_Bank_(all_PDB_sequenc) 3
STRING_v9.0.5_(STRING) 118
Uniprot_2018_03_genome 11796
NCBI_2017_08_genome 14959
Protozoadb_2010_08_(Protozoadb) 0

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.