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  Home > SCOP hierarchy > Domain combination - 53474,_gap_,49785

Domain combinations for 53474,_gap_,49785 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53474 - alpha/beta-Hydrolases
49785 - Galactose-binding domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Adineta_vaga 2
Caenorhabditis_japonica_ 1
Schistosoma_mansoni_ 1
Mnemiopsis_leidyi   (Sea walnut)   0
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 1
Sporisorium_reilianum_22 0
Ustilago_maydis_ 0
Apiospora_montagnei_NRRL_25634_v1.0 0
Nectria_haematococca_mpVI_ 2
Zasmidium_cellare_ATCC_36951_v1.0 1
Pichia_stipitis_CBS_6054_ 0
Candida_guilliermondii_ATCC_6260_ 0
Coccomyxa_subellipsoidea_sp._C-169_v2 1
Chlorella_vulgaris_ 1
Micromonas_pusilla_CCMP1545_v3.0 0
Thecamonas_trahens_ATCC_50062_ 2
Bigelowiella_natans_CCMP2755_22 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_ultimum_v1.7-2 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_sojae_1.1 0
Phytophthora_infestans_T30-4_ 0
Perkinsus_marinus_ATCC_50983_ 1
Cryptosporidium_hominis 0
Cryptosporidium_muris 0
Cryptosporidium_parvum_Iowa_II 0
Neospora_caninum 0
Toxoplasma_gondii_VEG 0
Toxoplasma_gondii_ME49 0
Toxoplasma_gondii_GT1 0
Symbiodinium_minutum_clade_B1_v1.2 1
Naegleria_gruberi_ 0
Emiliania_huxleyi_CCMP1516_ 2
Pseudanabaena_sp._PCC_7367 1
Synechocystis_sp._PCC_6803 1
Synechococcus_elongatus_PCC_7942 1
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 1
Geitlerinema_sp._PCC_7407 1
Cyanothece_sp._PCC_8802 1
Gloeocapsa_sp._PCC_7428 1
Microcystis_aeruginosa_NIES-843 1
Calothrix_sp._PCC_7507 1
Anabaena_variabilis_ATCC_29413 1
Nostoc_sp._PCC_7107 1
Nostoc_sp._PCC_7524 1
Conexibacter_woesei_DSM_14684 7
Slackia_heliotrinireducens_DSM_20476 0
Rubrobacter_xylanophilus_DSM_9941 2
Ilumatobacter_coccineus 0
Thermobispora_bispora_DSM_43833 0
Nakamurella_multipartita_DSM_44233 0
Modestobacter_marinus 0
Blastococcus_saxobsidens_DD2 1
Geodermatophilus_obscurus_DSM_43160 0
Catenulispora_acidiphila_DSM_44928 0
Stackebrandtia_nassauensis_DSM_44728 0
Frankia_symbiont_of_Datisca_glomerata 1
Frankia_sp._EAN1pec 2
Frankia_alni_ACN14a 2
Streptosporangium_roseum_DSM_43021 0
Kitasatospora_setae_KM-6054 0
Streptomyces_coelicolor_A3(2) 0
Streptomyces_sp._PAMC26508 1
Streptomyces_flavogriseus_ATCC_33331 1
Streptomyces_sp._SirexAA-E 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1
Streptomyces_bingchenggensis_BCW-1 1
Streptomyces_violaceusniger_Tu_4113 1
Streptomyces_avermitilis_MA-4680 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_scabiei_87.22 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinosynnema_mirum_DSM_43827 0
Saccharomonospora_viridis_DSM_43017 0
Pseudonocardia_dioxanivorans_CB1190 1
Saccharopolyspora_erythraea_NRRL_2338 0
Amycolatopsis_mediterranei_U32 3
Nocardioides_sp._JS614 0
Microlunatus_phosphovorus_NM-1 0
Salinispora_arenicola_CNS-205 0
Salinispora_tropica_CNB-440 0
Verrucosispora_maris_AB-18-032 1
Micromonospora_sp._L5 0
Micromonospora_aurantiaca_ATCC_27029 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 1
Actinoplanes_missouriensis_431 1
Segniliparus_rotundus_DSM_44985 1
Tsukamurella_paurometabola_DSM_20162 0
Gordonia_sp._KTR9 1
Gordonia_polyisoprenivorans_VH2 1
Gordonia_bronchialis_DSM_43247 0
Rhodococcus_jostii_RHA1 2
Rhodococcus_equi_103S 1
Rhodococcus_opacus_B4 2
Rhodococcus_erythropolis_PR4 2
Nocardia_cyriacigeorgica_GUH-2 1
Nocardia_farcinica_IFM_10152 1
Amycolicicoccus_subflavus_DQS3-9A1 1
Mycobacterium_massiliense_str._GO_06 0
Mycobacterium_abscessus_ATCC_19977 0
Mycobacterium_sp._JLS 1
Mycobacterium_intracellulare_ATCC_13950 0
Mycobacterium_canettii_CIPT_140010059 1
Mycobacterium_africanum_GM041182 1
Mycobacterium_tuberculosis_KZN_1435 1
Mycobacterium_tuberculosis 1
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 1
Mycobacterium_chubuense_NBB4 1
Kytococcus_sedentarius_DSM_20547 1
Beutenbergia_cavernae_DSM_12333 1
Intrasporangium_calvum_DSM_43043 0
Cellulomonas_flavigena_DSM_20109 1
Sphaerobacter_thermophilus_DSM_20745 2
Thermaerobacter_marianensis_DSM_12885 1
Clostridium_difficile_630 1
Lactobacillus_ruminis_ATCC_27782 0
Lactobacillus_plantarum_JDM1 0
Pediococcus_claussenii_ATCC_BAA-344 0
Pediococcus_pentosaceus_ATCC_25745 0
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 0
Paenibacillus_terrae_HPL-003 1
Listeria_welshimeri_serovar_6b_str._SLCC5334 1
Listeria_innocua_Clip11262 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1
Gemmatimonas_aurantiaca_T-27 5
Melioribacter_roseus_P3M 1
Ignavibacterium_album_JCM_16511 1
Haliscomenobacter_hydrossis_DSM_1100 2
Saprospira_grandis_str._Lewin 1
Niastella_koreensis_GR20-10 0
Chitinophaga_pinensis_DSM_2588 1
Belliella_baltica_DSM_15883 1
Cyclobacterium_marinum_DSM_745 2
Marivirga_tractuosa_DSM_4126 0
Fibrella_aestuarina 3
Leadbetterella_byssophila_DSM_17132 1
Dyadobacter_fermentans_DSM_18053 2
Spirosoma_linguale_DSM_74 2
Runella_slithyformis_DSM_19594 4
Alistipes_finegoldii_DSM_17242 1
Bacteroides_vulgatus_ATCC_8482 0
Pedobacter_saltans_DSM_12145 1
Solitalea_canadensis_DSM_3403 1
Pedobacter_heparinus_DSM_2366 2
Sphingobacterium_sp._21 1
Zunongwangia_profunda_SM-A87 1
Krokinobacter_sp._4H-3-7-5 2
Gramella_forsetii_KT0803 1
Lacinutrix_sp._5H-3-7-4 1
Maribacter_sp._HTCC2170 1
Robiginitalea_biformata_HTCC2501 0
Croceibacter_atlanticus_HTCC2559 1
Aequorivita_sublithincola_DSM_14238 1
Zobellia_galactanivorans 0
Muricauda_ruestringensis_DSM_13258 2
Flavobacteriaceae_bacterium_3519-10 1
Polaribacter_sp._MED152 1
Flavobacterium_johnsoniae_UW101 1
Opitutus_terrae_PB90-1 1
Spirochaeta_smaragdinae_DSM_11293 1
Candidatus_Chloracidobacterium_thermophilum_B 1
Candidatus_Solibacter_usitatus_Ellin6076 4
Granulicella_tundricola_MP5ACTX9 2
Granulicella_mallensis_MP5ACTX8 1
Candidatus_Koribacter_versatilis_Ellin345 0
Terriglobus_saanensis_SP1PR4 0
Terriglobus_roseus_DSM_18391 2
Acidobacterium_capsulatum_ATCC_51196 1
Desulfovibrio_africanus_str._Walvis_Bay 1
Haliangium_ochraceum_DSM_14365 0
Stigmatella_aurantiaca_DW4/3-1 0
Corallococcus_coralloides_DSM_2259 1
Myxococcus_xanthus_DK_1622 0
Myxococcus_fulvus_HW-1 0
Rubrivivax_gelatinosus_IL144 1
Burkholderia_phytofirmans_PsJN 0
Delftia_sp._Cs1-4 1
Delftia_acidovorans_SPH-1 1
Variovorax_paradoxus_S110 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Bordetella_petrii_DSM_12804 1
Achromobacter_xylosoxidans 1
Caulobacter_sp._K31 2
Caulobacter_crescentus_NA1000 2
Caulobacter_segnis_ATCC_21756 2
Phenylobacterium_zucineum_HLK1 1
Sphingomonas_wittichii_RW1 2
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1
Azospirillum_sp._B510 1
Azospirillum_brasilense_Sp245 1
Gluconacetobacter_xylinus_NBRC_3288 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_621H 1
Methylobacterium_chloromethanicum_CM4 1
Methylobacterium_extorquens_AM1 1
Methylobacterium_sp._4-46 1
Methylobacterium_populi_BJ001 1
Mesorhizobium_opportunistum_WSM2075 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2
Bradyrhizobium_sp._ORS_278 1
Shewanella_loihica_PV-4 1
Colwellia_psychrerythraea_34H 1
Frateuria_aurantia_DSM_6220 1
Pseudoxanthomonas_spadix_BD-a59 2
Pseudoxanthomonas_suwonensis_11-1 1
Stenotrophomonas_maltophilia_K279a 1
Xylella_fastidiosa_M23 0
Xanthomonas_axonopodis_pv._citri_str._306 1
Xanthomonas_albilineans_GPE_PC73 1
Xanthomonas_oryzae_pv._oryzae_PXO99A 1
Xanthomonas_campestris_pv._campestris_str._B100 1
gamma_proteobacterium_HdN1 0
halophilic_archaeon_DL31 3
Haloquadratum_walsbyi_DSM_16790 1

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Strains
Genome     Number
Batrachochytrium_dendrobatidis_JAM81_ 0
Neospora_caninum_Nc-Liverpool_6.2 0
Chroococcidiopsis_thermalis_PCC_7203 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1
Synechocystis_sp._PCC_6803_substr._GT-I 1
Synechocystis_sp._PCC_6803 1
Cyanobium_gracile_PCC_6307 1
Synechococcus_sp._JA-2-3B'a(2-13) 1
Synechococcus_sp._JA-3-3Ab 1
Synechococcus_elongatus_PCC_6301 1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Cyanothece_sp._PCC_7822 1
Cyanothece_sp._PCC_7424 1
Cyanothece_sp._ATCC_51142 1
Cyanothece_sp._PCC_8801 1
Cyanobacterium_aponinum_PCC_10605 1
Cyanobacterium_stanieri_PCC_7202 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1
Stanieria_cyanosphaera_PCC_7437 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1
Frankia_sp._EuI1c 4
Frankia_sp._CcI3 2
Streptomyces_albus_J1074 1
Streptomyces_rapamycinicus_NRRL_5491 2
Streptomyces_davawensis_JCM_4913 1
Streptomyces_fulvissimus_DSM_40593 2
Streptomyces_venezuelae_ATCC_10712 2
Streptomyces_collinus_Tu_365 0
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Saccharothrix_espanaensis_DSM_44229 1
Amycolatopsis_mediterranei_RB 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_mediterranei_S699 3
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Rhodococcus_erythropolis_CCM2595 2
Nocardia_brasiliensis_ATCC_700358 3
Mycobacterium_sp._MOTT36Y 0
Mycobacterium_sp._JDM601 0
Mycobacterium_abscessus_subsp._bolletii_50594 0
Mycobacterium_sp._KMS 1
Mycobacterium_sp._MCS 1
Mycobacterium_yongonense_05-1390 0
Mycobacterium_intracellulare_MOTT-64 0
Mycobacterium_indicus_pranii_MTCC_9506 0
Mycobacterium_intracellulare_MOTT-02 0
Mycobacterium_canettii_CIPT_140070017 1
Mycobacterium_canettii_CIPT_140060008 1
Mycobacterium_canettii_CIPT_140070008 1
Mycobacterium_canettii_CIPT_140070010 1
Mycobacterium_tuberculosis_EAI5/NITR206 1
Mycobacterium_tuberculosis_EAI5 1
Mycobacterium_tuberculosis_CAS/NITR204 1
Mycobacterium_tuberculosis_str._Beijing/NITR203 1
Mycobacterium_tuberculosis_UT205 1
Mycobacterium_tuberculosis_RGTB423 1
Mycobacterium_tuberculosis_CTRI-2 1
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 1
Mycobacterium_tuberculosis_KZN_605 1
Mycobacterium_tuberculosis_KZN_4207 1
Mycobacterium_tuberculosis_CCDC5180 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_CCDC5079 1
Mycobacterium_tuberculosis_H37Ra 1
Mycobacterium_tuberculosis_str._Haarlem/NITR202 1
Mycobacterium_tuberculosis_str._Haarlem 1
Mycobacterium_tuberculosis_F11 1
Mycobacterium_tuberculosis_H37Rv 1
Mycobacterium_bovis_AF2122/97 1
Mycobacterium_bovis_BCG_str._Korea_1168P 1
Mycobacterium_bovis_BCG_str._Mexico 1
Mycobacterium_bovis_BCG_str._Tokyo_172 1
Clostridium_difficile_BI1 0
Clostridium_difficile_R20291 0
Clostridium_difficile_CD196 0
Lactobacillus_plantarum_16 0
Lactobacillus_plantarum_ZJ316 0
Lactobacillus_plantarum_subsp._plantarum_ST-III 0
Lactobacillus_plantarum_subsp._plantarum_P-8 0
Lactobacillus_plantarum_WCFS1 0
Pediococcus_pentosaceus_SL4 0
Thermobacillus_composti_KWC4 2
Paenibacillus_sp._Y412MC10 1
Listeria_monocytogenes_EGD_sequence 1
Listeria_monocytogenes_N53-1 1
Listeria_monocytogenes_La111 1
Listeria_monocytogenes_serotype_4b_str._LL195 1
Listeria_monocytogenes_07PF0776 1
Listeria_monocytogenes_M7 1
Listeria_monocytogenes_J1-220 1
Listeria_monocytogenes_J1816 1
Listeria_monocytogenes_SLCC2376 1
Listeria_monocytogenes_SLCC5850 1
Listeria_monocytogenes_ATCC_19117 1
Listeria_monocytogenes_L312 1
Listeria_monocytogenes_SLCC2479 1
Listeria_monocytogenes_SLCC7179 1
Listeria_monocytogenes_SLCC2540 1
Listeria_monocytogenes_SLCC2378 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1
Listeria_monocytogenes_08-5578 1
Listeria_monocytogenes_08-5923 1
Listeria_monocytogenes_L99 1
Listeria_monocytogenes_HCC23 1
Listeria_monocytogenes_10403S 1
Listeria_monocytogenes_J0161 1
Listeria_monocytogenes_Finland_1998 1
Listeria_monocytogenes_FSL_R2-561 1
Listeria_monocytogenes_serotype_4b_str._F2365 1
Listeria_monocytogenes_EGD-e 1
Emticicia_oligotrophica_DSM_17448 0
Alistipes_shahii_WAL_8301 1
Nonlabens_dokdonensis_DSW-6 0
Psychroflexus_torquis_ATCC_700755 2
Singulisphaera_acidiphila_DSM_18658 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1
Myxococcus_stipitatus_DSM_14675 0
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1
Caulobacter_crescentus_CB15 2
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1
Zymomonas_mobilis_subsp._mobilis_CP4 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1
Paracoccus_aminophilus_JCM_7686 1
Gluconacetobacter_diazotrophicus_PAl_5 1
Gluconobacter_oxydans_H24 4
Methylobacterium_extorquens_DM4 1
Methylobacterium_extorquens_PA1 1
Sinorhizobium_meliloti_2011 1
Sinorhizobium_meliloti_GR4 1
Sinorhizobium_meliloti_BL225C 1
Sinorhizobium_meliloti_1021 1
Rhizobium_tropici_CIAT_899 1
Mesorhizobium_australicum_WSM2073 2
Alteromonas_macleodii_str._'English_Channel_673' 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1
Alteromonas_macleodii_ATCC_27126 1
Alcanivorax_dieselolei_B5 1
Stenotrophomonas_maltophilia_D457 1
Stenotrophomonas_maltophilia_JV3 1
Stenotrophomonas_maltophilia_R551-3 2
Xylella_fastidiosa_subsp._fastidiosa_GB514 0
Xylella_fastidiosa_M12 0
Xylella_fastidiosa_Temecula1 0
Xylella_fastidiosa_9a5c 0
Xanthomonas_citri_subsp._citri_Aw12879 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1
Xanthomonas_axonopodis_Xac29-1 1
Xanthomonas_oryzae_pv._oryzicola_BLS256 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1
Xanthomonas_campestris_pv._raphani_756C 1
Xanthomonas_campestris_pv._campestris_str._8004 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1
Pseudomonas_denitrificans_ATCC_13867 0
Pseudomonas_putida_DOT-T1E 1
Pseudomonas_putida_ND6 1
Haloquadratum_walsbyi_C23 1

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Others
Genome     Number
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 1
NCBI_plasmid_sequences_(Plasmids) 10
PDB_chains_(SCOP_1.75)_(PDB) 4
Protozoadb_2010_08_(Protozoadb) 0
Protein_Data_Bank_(all_PDB_sequenc) 55
STRING_v9.0.5_(STRING) 109
Uniprot_2018_03_genome 22530
NCBI_2017_08_genome 12892

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.