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Home > SCOP hierarchy > Domain combination - _gap_,50729,144000,_gap_

Domain combinations for _gap_,50729,144000,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50729 - PH domain-like
144000 - Oxysterol-binding protein-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.

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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome Number

Homo_sapiens_76_38 (Human) 1

Gorilla_gorilla_76_3.1 (Western gorilla) 1

Papio_anubis_76 (Olive baboon) 1

Rattus_norvegicus_76_5.0 (Norway rat) 1

Mus_musculus_76_38 (House mouse) 3

Dipodomys_ordii_76_1 (Ord's kangaroo rat) 1

Heterocephalus_glaber_v1.7-2 (Naked mole-rat) 1

Cavia_porcellus_76_3 (Domestic guinea pig) 1

Tupaia_belangeri_76 (Northern tree shrew) 1

Sus_scrofa_76_10.2 (Pig) 1

Bos_taurus_76_3.1 (Cattle) 1

Mustela_putorius_furo_76_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_76_1 (Giant panda) 1

Felis_catus_76_6.2 (Domestic cat) 1

Pteropus_vampyrus_76_1 (Large flying fox) 1

Loxodonta_africana_76_3 (African savanna elephant) 1

Macropus_eugenii_76_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_76_7.0 (Tasmanian devil) 1

Saccoglossus_kowalevskii_v3.0 3

Petromyzon_marinus_76_7.0 (Sea lamprey) 1

Meleagris_gallopavo_76_2 (Turkey) 2

Gallus_gallus_76_4 (Chicken) 1

Anas_platyrhynchos_76_1.0 (Mallard) 1

Taeniopygia_guttata_76_3.2.4 (Zebra finch) 1

Ficedula_albicollis_76_1.0 (Collared flycatcher) 1

Pelodiscus_sinensis_76_1.0 (Chinese soft-shelled turtle) 2

Anolis_carolinensis_76_2.0 (Green anole) 1

Latimeria_chalumnae_76_1 (Coelacanth) 1

Lepisosteus_oculatus_76 (Spotted gar) 1

Tetraodon_nigroviridis_76_8 (Spotted green pufferfish) 2

Takifugu_rubripes_76_4 (Torafugu) 4

Gasterosteus_aculeatus_76_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_76_4.4.2 (Southern platyfish) 2

Poecilia_formosa_76 (Amazon molly) 1

Oreochromis_niloticus_76_1.0 (Nile tilapia) 3

Astyanax_mexicanus_76 (Mexican tetra) 1

Danio_rerio_76_9 (Zebrafish) 2

Crassostrea_gigas_22 (Pacific oyster) 1

Capitella_sp._I_ 1

Nasonia_vitripennis_ (Jewel wasp) 1

Pogonomyrmex_barbatus_v1.2 (Red harvester ant) 1

Camponotus_floridanus_v3.3 (Florida carpenter ant) 1

Drosophila_grimshawi_1.3 1

Drosophila_willistoni_1.3 1

Drosophila_pseudoobscura_2.13 1

Drosophila_yakuba_1.3 1

Drosophila_sechellia_1.3 1

Drosophila_melanogaster_76_5 (Fruit fly) 6

Drosophila_virilis_1.2 1

Drosophila_mojavensis_1.3 1

Aedes_aegypti_55_(Not_maintained) (Yellow fever mosquito) 1

Culex_pipiens_quinquefasciatus_ (Southern house mosquito) 1

Anopheles_gambiae_49_3j (African malaria mosquito) 1

Tribolium_castaneum_3.0 (Red flour beetle) 1

Pediculus_humanus_corporis__(Early_assembly) (Human body louse) 1

Caenorhabditis_brenneri_ 1

Trichinella_spiralis_22 1

Capsaspora_owczarzaki_ATCC_30864_ 1

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Strains
Genome Number

Drosophila_melanogaster_FlyBase_5.12_(FlyBase) (Fruit fly) 6

Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase) (African malaria mosquito) 1

Longest transcript per gene
Genome Number

Homo_sapiens_69_37 (Human) 1

Gorilla_gorilla_69_3.1 (Western gorilla) 1

Rattus_norvegicus_69_3.4 (Norway rat) 1

Mus_musculus_69_38 (House mouse) 1

Dipodomys_ordii_69_1 (Ord's kangaroo rat) 1

Cavia_porcellus_69_3 (Domestic guinea pig) 1

Tupaia_belangeri_69 (Northern tree shrew) 1

Sus_scrofa_69_10.2 (Pig) 1

Bos_taurus_69_3.1 (Cattle) 1

Mustela_putorius_furo_69_1.0 (Domestic ferret) 1

Ailuropoda_melanoleuca_69_1 (Giant panda) 1

Felis_catus_69 (Domestic cat) 1

Pteropus_vampyrus_69_1 (Large flying fox) 1

Loxodonta_africana_69_3 (African savanna elephant) 1

Macropus_eugenii_69_1.0 (Tammar wallaby) 1

Sarcophilus_harrisii_69_7.0 (Tasmanian devil) 1

Petromyzon_marinus_69_7.0 (Sea lamprey) 1

Meleagris_gallopavo_69_2 (Turkey) 2

Taeniopygia_guttata_69_3.2.4 (Zebra finch) 1

Pelodiscus_sinensis_69_1.0 (Chinese soft-shelled turtle) 1

Latimeria_chalumnae_69_1 (Coelacanth) 1

Tetraodon_nigroviridis_69_8 (Spotted green pufferfish) 2

Takifugu_rubripes_69_4 (Torafugu) 1

Gasterosteus_aculeatus_69_1 (Three-spined stickleback) 1

Xiphophorus_maculatus_69_4.4.2 (Southern platyfish) 2

Oreochromis_niloticus_69_1.0 (Nile tilapia) 2

Danio_rerio_69_9 (Zebrafish) 1

Drosophila_melanogaster_69_5 (Fruit fly) 1

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Others
Genome Number

Homo_sapiens_75_37_(old_version_GRC) (Human) 1

Homo_sapiens__(NCBI_version) (Human) 1

Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate) (House mouse) 1

STRING_v9.0.5_(STRING) 28

Uniprot_2018_03_genome 2448

NCBI_2017_08_genome 971

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Domain combinations for _gap_,50729,144000,_gap_ superfamilies in groups of genomes