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Domain combinations for Ras GEF superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Ras GEF domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   169 169
Pan_troglodytes_76_2.1.4   (Chimpanzee)   31 31
Gorilla_gorilla_76_3.1   (Western gorilla)   38 38
Pongo_abelii_76_2   (Sumatran orangutan)   30 30
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   31 31
Papio_anubis_76   (Olive baboon)   46 46
Macaca_mulatta_76_1   (Rhesus monkey)   97 97
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   90 89
Otolemur_garnettii_76_3   (Small-eared galago)   31 31
Microcebus_murinus_76_1   (Gray mouse lemur)   29 24
Rattus_norvegicus_76_5.0   (Norway rat)   58 58
Mus_musculus_76_38   (House mouse)   113 113
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   40 31
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   34 34
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   30 29
Cavia_porcellus_76_3   (Domestic guinea pig)   44 44
Oryctolagus_cuniculus_76_2   (Rabbit)   48 45
Ochotona_princeps_76   (American pika)   33 28
Tupaia_belangeri_76   (Northern tree shrew)   54 46
Sus_scrofa_76_10.2   (Pig)   40 40
Bos_taurus_76_3.1   (Cattle)   32 31
Ovis_aries_76_3.1   (Sheep)   40 39
Vicugna_pacos_76_1   (Alpaca)   23 21
Tursiops_truncatus_76_1   (Bottlenose dolphin)   31 29
Mustela_putorius_furo_76_1.0   (Domestic ferret)   38 38
Ailuropoda_melanoleuca_76_1   (Giant panda)   41 41
Canis_familiaris_76_3.1   (Dog)   64 64
Felis_catus_76_6.2   (Domestic cat)   33 33
Equus_caballus_76_2   (Horse)   40 40
Myotis_lucifugus_76_2.0   (Little brown bat)   32 32
Pteropus_vampyrus_76_1   (Large flying fox)   34 29
Sorex_araneus_76_1   (European shrew)   27 23
Erinaceus_europaeus_76   (Western European hedgehog)   27 22
Procavia_capensis_76_1   (Cape rock hyrax)   32 29
Loxodonta_africana_76_3   (African savanna elephant)   47 47
Echinops_telfairi_76   (Small Madagascar hedgehog)   32 28
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   170 156
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   26 22
Macropus_eugenii_76_1.0   (Tammar wallaby)   33 29
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   38 38
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   27 27
Ornithorhynchus_anatinus_76_5   (Platypus)   34 34
Saccoglossus_kowalevskii_v3.0 26 26
Petromyzon_marinus_76_7.0   (Sea lamprey)   8 8
Meleagris_gallopavo_76_2   (Turkey)   25 25
Gallus_gallus_76_4   (Chicken)   23 23
Anas_platyrhynchos_76_1.0   (Mallard)   23 23
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   26 26
Ficedula_albicollis_76_1.0   (Collared flycatcher)   25 25
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   29 29
Anolis_carolinensis_76_2.0   (Green anole)   30 30
Xenopus_laevis_   (African clawed frog)   25 25
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   33 33
Latimeria_chalumnae_76_1   (Coelacanth)   35 34
Lepisosteus_oculatus_76   (Spotted gar)   40 40
Gadus_morhua_76_1   (Atlantic cod)   34 34
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   43 43
Takifugu_rubripes_76_4   (Torafugu)   125 125
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   45 45
Oryzias_latipes_76_1   (Japanese medaka)   47 47
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   33 33
Poecilia_formosa_76   (Amazon molly)   35 35
Oreochromis_niloticus_76_1.0   (Nile tilapia)   53 53
Astyanax_mexicanus_76   (Mexican tetra)   40 40
Danio_rerio_76_9   (Zebrafish)   60 60
Oikopleura_dioica 9 9
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   20 20
Ciona_intestinalis_76   (Vase tunicate)   12 12
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   20 19
Adineta_vaga 47 46
Octopus_bimaculoides_280 19 19
Crassostrea_gigas_22   (Pacific oyster)   12 12
Lottia_gigantea_   (Owl limpet)   14 14
Helobdella_robusta_ 17 17
Capitella_sp._I_ 13 13
Danaus_plexippus_OGS1.0   (Monarch butterfly)   8 8
Heliconius_melpomene_   (Postman butterfly)   12 10
Bombyx_mori_   (Domestic silkworm)   11 11
Nasonia_vitripennis_   (Jewel wasp)   7 7
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   26 26
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   11 11
Linepithema_humile_v1.1   (Argentine ant)   9 9
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   9 9
Solenopsis_invicta_v.2.2.3   (Red fire ant)   10 10
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   10 9
Atta_cephalotes_v1.1 11 10
Camponotus_floridanus_v3.3   (Florida carpenter ant)   15 15
Lucilia_cuprina   (Australian sheep blowfly)   8 8
Drosophila_grimshawi_1.3 11 11
Drosophila_willistoni_1.3 10 10
Drosophila_pseudoobscura_2.13 10 10
Drosophila_persimilis_1.3 10 10
Drosophila_suzukii 9 9
Drosophila_yakuba_1.3 11 11
Drosophila_simulans_1.3 12 12
Drosophila_sechellia_1.3 10 10
Drosophila_melanogaster_76_5   (Fruit fly)   33 33
Drosophila_erecta_1.3 10 10
Drosophila_ananassae_1.3 10 10
Drosophila_virilis_1.2 11 11
Drosophila_mojavensis_1.3 10 10
Megaselia_scalaris_22 4 4
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   12 12
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   13 13
Anopheles_darlingi_22   (American malaria mosquito)   10 9
Anopheles_gambiae_49_3j   (African malaria mosquito)   10 10
Tribolium_castaneum_3.0   (Red flour beetle)   12 12
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   9 9
Acyrthosiphon_pisum_   (Pea aphid)   10 10
Rhodnius_prolixus_22 11 11
Daphnia_pulex_   (Common water flea)   11 11
Strigamia_maritima_22 11 11
Sarcoptes_scabiei 10 10
Tetranychus_urticae_   (Two-spotted spider mite)   9 9
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   10 10
Pristionchus_pacificus_ 8 8
Meloidogyne_incognita_   (Southern root-knot nematode)   6 5
Meloidogyne_hapla_ 3 3
Onchocerca_volvulus_22 8 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   10 10
Caenorhabditis_japonica_ 9 9
Caenorhabditis_brenneri_ 9 9
Caenorhabditis_remanei_ 9 9
Caenorhabditis_elegans_76_235   (Roundworm)   25 25
Caenorhabditis_briggsae_2 7 7
Trichinella_spiralis_22 13 13
Hymenolepis_microstoma_ 9 6
Echinococcus_multilocularis_ 11 8
Echinococcus_granulosus_ 11 8
Taenia_solium_   (Pork tapeworm)   12 9
Schistosoma_mansoni_ 15 11
Mnemiopsis_leidyi   (Sea walnut)   15 14
Thelohanellus_kitauei 4 4
Acropora_digitifera_v1.0 15 15
Nematostella_vectensis_1.0   (Starlet sea anemone)   19 19
Hydra_vulgaris 11 11
Amphimedon_queenslandica 27 26
Trichoplax_adhaerens_ 12 12
Proterospongia_sp._ATCC_50818_ 15 15
Monosiga_brevicollis_ 14 14
Sphaeroforma_arctica_JP610_ 31 31
Capsaspora_owczarzaki_ATCC_30864_ 30 30
Conidiobolus_coronatus_NRRL28638_v1.0 13 13
Mortierella_verticillata_NRRL_6337_ 17 16
Phycomyces_blakesleeanus_ 21 20
Rhizopus_oryzae_RA_99-880_ 33 32
Mucor_circinelloides_ 19 19
Rhizomucor_miehei_CAU432_ 18 17
Malassezia_globosa_CBS_7966_ 10 8
Sporisorium_reilianum_22 6 5
Ustilago_maydis_ 6 5
Mixia_osmundae_IAM_14324_v1.0 4 4
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 4 4
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 4 4
Melampsora_laricis-populina_ 6 6
Rhodotorula_graminis_WP1_v1.0 4 4
Sporobolomyces_roseus_IAM_13481_ 3 3
Microbotryum_violaceum_22 7 6
Wallemia_sebi_v1.0 6 5
Sphaerobolus_stellatus_v1.0 14 13
Piloderma_croceum_F_1598_v1.0 14 13
Serpula_lacrymans_var._lacrymans_S7.9_ 7 7
Coniophora_puteana 9 8
Hydnomerulius_pinastri_v2.0 9 8
Paxillus_rubicundulus_Ve08.2h10_v1.0 9 8
Pisolithus_microcarpus_441_v1.0 8 7
Pisolithus_tinctorius_Marx_270_v1.0 8 7
Scleroderma_citrinum_Foug_A_v1.0 8 7
Coprinopsis_cinerea_okayama7_130_v3 12 11
Pleurotus_ostreatus_   (Oyster mushroom)   7 7
Amanita_thiersii_Skay4041_v1.0 8 7
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7 6
Galerina_marginata_v1.0 11 10
Hebeloma_cylindrosporum_h7_v2.0 10 9
Laccaria_bicolor_S238N-H82_ 6 6
Agaricus_bisporus_var._bisporus_ 8 7
Schizophyllum_commune_ 6 6
Stereum_hirsutum_FP-91666_SS1__v1.0 10 9
Heterobasidion_annosum_ 10 9
Gloeophyllum_trabeumv1.0 10 9
Punctularia_strigosozonata_v1.0 13 12
Sebacina_vermifera_MAFF_305830_v1.0 8 7
Fomitiporia_mediterranea_v1.0 10 9
Tulasnella_calospora_AL13/4D_v1.0 9 8
Postia_placenta_ 11 10
Wolfiporia_cocos_MD-104_SS10__v1.0 8 7
Fomitopsis_pinicolav1.0 8 7
Fomitopsis_pinicola_FP-58527_SS1_v3.0 8 7
Phanerochaete_chrysosporium_RP-78_2.1 8 7
Dichomitus_squalens 8 7
Trametes_versicolor_v1.0 7 6
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 4 4
Magnaporthe_grisea_70-15_ 4 4
Podospora_anserina_ 4 4
Sporotrichum_thermophile_ATCC_42464_ 4 4
Thielavia_terrestris_NRRL_8126_ 4 4
Chaetomium_globosum_CBS_148.51_ 4 4
Neurospora_tetrasperma_ 4 4
Neurospora_discreta_FGSC_8579_ 4 4
Neurospora_crassa_OR74A_ 4 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   4 4
Verticillium_albo-atrum_VaMs.102_ 3 3
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 4 4
Glomerella_graminicola_22 4 4
Fusarium_graminearum_ 4 4
Nectria_haematococca_mpVI_ 4 4
Fusarium_oxysporum_f._sp._lycopersici_4286_ 4 4
Fusarium_verticillioides_7600_ 5 5
Trichoderma_asperellum_CBS_433.97_v1.0 4 4
Trichoderma_atroviride_ 3 3
Trichoderma_citrinoviride_v1.0 4 4
Trichoderma_reesei_1.2 4 4
Trichoderma_virens_Gv29-8_ 4 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 4 4
Trichoderma_harzianum_CBS_226.95_v1.0 4 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   4 4
Botrytis_cinerea_B05.10_ 5 5
Sclerotinia_sclerotiorum_ 4 4
Blumeria_graminis_22 4 4
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 4 4
Setosphaeria_turcica_v1.0 4 4
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4 4
Cochliobolus_victoriae_FI3_v1.0 4 4
Cochliobolus_carbonum_26-R-13_v1.0 4 4
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4 4
Alternaria_brassicicola_ 3 3
Cochliobolus_lunatus_m118_v2.0 4 4
Pyrenophora_teres_f._teres_22 4 4
Pyrenophora_tritici-repentis_ 4 4
Stagonospora_nodorum_ 4 4
Mycosphaerella_graminicola_IPO323_ 4 4
Zasmidium_cellare_ATCC_36951_v1.0 4 4
Dothistroma_septosporum 4 4
Septoria_musiva_v1.0 4 4
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3
Paracoccidioides_brasiliensis_Pb18_ 4 4
Coccidioides_posadasii_RMSCC_3488_ 5 5
Coccidioides_immitis_RS_ 6 6
Ajellomyces_dermatitidis_SLH14081_ 7 7
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 7 7
Microsporum_canis_CBS_113480_ 6 5
Trichophyton_equinum_CBS_127.97_ 5 5
Trichophyton_verrucosum_HKI_0517_ 4 4
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 6 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 5 5
Aspergillus_zonatus_v1.0 7 7
Penicillium_chrysogenum_Wisconsin_54-1255_ 9 9
Penicillium_chrysogenum_v1.0 7 7
Aspergillus_acidus_v1.0 7 7
Aspergillus_fumigatus_Af293 4 4
Aspergillus_brasiliensis_v1.0 6 6
Aspergillus_nidulans_FGSC_A4_ 6 6
Aspergillus_sydowii_v1.0 8 8
Aspergillus_versicolor_v1.0 7 7
Aspergillus_glaucus 6 6
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 5 5
Aspergillus_terreus_NIH2624_ 6 6
Aspergillus_tubingensis_v1.0 6 6
Aspergillus_wentii_v1.0 6 6
Aspergillus_oryzae_RIB40_ 7 7
Aspergillus_niger_22 7 7
Aspergillus_niger_ATCC_1015_ 5 5
Aspergillus_flavus_NRRL3357_ 6 6
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 6 6
Tuber_melanosporum_Mel28_22 5 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   5 5
Hansenula_polymorpha_v2.0 6 4
Dekkera_bruxellensis_CBS_2499_v2.0 5 4
Pichia_membranifaciensv1.0 5 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 5 4
Candida_dubliniensis_CD36_ 5 4
Candida_tropicalis_MYA-3404_ 5 4
Candida_parapsilosis_ 5 4
Candida_albicans_SC5314 6 5
Lodderomyces_elongisporus_NRRL_YB-4239_ 6 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 4
Pichia_stipitis_CBS_6054_ 5 4
Candida_guilliermondii_ATCC_6260_ 5 4
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 5 4
Debaromyces_hansenii 5 4
Wickerhamomyces_anomalus 7 5
Pichia_pastoris_GS115_ 6 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 3 3
Yarrowia_lipolytica_CLIB122 5 4
Candida_lusitaniae_ATCC_42720_ 6 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 6 4
Vanderwaltozyma_polyspora_DSM_70294_ 6 5
Candida_glabrata_CBS138 6 5
Kluyveromyces_thermotolerans_CBS_6340 5 4
Lachancea_kluyveri_ 4 3
Kluyveromyces_waltii 5 4
Ashbya_gossypii_ATCC_10895_ 5 4
Zygosaccharomyces_rouxii_ 5 4
Saccharomyces_mikatae_MIT 6 5
Saccharomyces_paradoxus_MIT 7 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   5 4
Saccharomyces_bayanus_MIT 8 7
Kluyveromyces_lactis 5 4
Schizosaccharomyces_cryophilus_OY26_22 2 2
Schizosaccharomyces_octosporus_yFS286_ 2 2
Schizosaccharomyces_japonicus_yFS275_ 2 2
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Catenaria_anguillulae_PL171_v1.0 10 10
Allomyces_macrogynus_ATCC_38327_ 25 25
Spizellomyces_punctatus_DAOM_BR117_ 15 15
Dictyostelium_discoideum 29 29
Dictyostelium_purpureum_ 30 30
Entamoeba_dispar_1.2 44 44
Entamoeba_invadens_1.2 64 64
Entamoeba_histolytica_1 45 45
Thecamonas_trahens_ATCC_50062_ 69 64
Bigelowiella_natans_CCMP2755_22 7 7
Trypanosoma_cruzi_strain_CL_Brener 4 4
Albugo_laibachii_22 4 4
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_arrhenomanes_ATCC_12531_22 5 5
Pythium_ultimum_v1.7-2 4 4
Pythium_aphanidermatum_DAOM_BR444_22 4 4
Pythium_irregulare_DAOM_BR486_22 4 4
Pythium_vexans_DAOM_BR484_22 4 4
Phytophthora_ramorum_1.1   (Sudden oak death agent)   4 4
Phytophthora_sojae_1.1 4 4
Phytophthora_infestans_T30-4_ 4 4
Phytophthora_capsici_ 4 4
Hyaloperonospora_arabidopsidis_22 3 3
Paramecium_tetraurelia_ 5 5
Tetrahymena_thermophila_SB210_1_ 3 3
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Naegleria_gruberi_ 28 28
Trichomonas_vaginalis_ 20 20
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 1 1
Waddlia_chondrophila_WSU_86-1044 3 3
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 1 1
Legionella_longbeachae_NSW150 2 2
Legionella_pneumophila_str._Corby 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   47 47
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   28 28
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   12 12
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   10 10
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   16 16
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 3 3
Cryptococcus_neoformans_JEC21_ 3 3
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 4 4
Coccidioides_posadasii_str._Silveira_ 5 5
Coccidioides_immitis_RMSCC_3703_ 5 5
Coccidioides_immitis_RMSCC_2394_ 5 5
Coccidioides_immitis_H538.4_ 5 5
Ajellomyces_dermatitidis_ER-3_ 5 5
Histoplasma_capsulatum_H143 5 5
Histoplasma_capsulatum_H88 4 4
Histoplasma_capsulatum_G186AR 4 4
Aspergillus_fumigatus_A1163_ 4 4
Candida_albicans_WO-1_ 6 5
Saccharomyces_cerevisiae_UC5 3 2
Saccharomyces_cerevisiae_PW5 4 3
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 3 2
Saccharomyces_cerevisiae_CBS7960 5 4
Saccharomyces_cerevisiae_YJM269 5 4
Saccharomyces_cerevisiae_T7 4 3
Saccharomyces_cerevisiae_FostersB 4 4
Saccharomyces_cerevisiae_FostersO 4 4
Saccharomyces_cerevisiae_Vin13 2 2
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 5 4
Saccharomyces_cerevisiae_W303 4 3
Saccharomyces_cerevisiae_JAY291 4 3
Saccharomyces_cerevisiae_AWRI1631 4 3
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_CLIB215 5 4
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 6 5
Saccharomyces_cerevisiae_YJM789 5 4
Saccharomyces_cerevisiae_RM11-1a 5 4
Saccharomyces_cerevisiae_RM11-1a_ 5 4
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   6 5
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JEL423_ 14 14
Batrachochytrium_dendrobatidis_JAM81_ 9 9
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   35 35
Pan_troglodytes_69_2.1.4   (Chimpanzee)   30 30
Gorilla_gorilla_69_3.1   (Western gorilla)   29 29
Pongo_abelii_69_2   (Sumatran orangutan)   29 29
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   29 29
Macaca_mulatta_69_1   (Rhesus monkey)   43 43
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   30 30
Otolemur_garnettii_69_3   (Small-eared galago)   29 29
Microcebus_murinus_69_1   (Gray mouse lemur)   29 24
Rattus_norvegicus_69_3.4   (Norway rat)   46 46
Mus_musculus_69_38   (House mouse)   44 44
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   40 31
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   31 31
Cavia_porcellus_69_3   (Domestic guinea pig)   39 39
Oryctolagus_cuniculus_69_2   (Rabbit)   45 44
Ochotona_princeps_69   (American pika)   33 28
Tupaia_belangeri_69   (Northern tree shrew)   54 46
Sus_scrofa_69_10.2   (Pig)   38 38
Bos_taurus_69_3.1   (Cattle)   30 29
Vicugna_pacos_69_1   (Alpaca)   23 21
Tursiops_truncatus_69_1   (Bottlenose dolphin)   31 29
Mustela_putorius_furo_69_1.0   (Domestic ferret)   35 35
Ailuropoda_melanoleuca_69_1   (Giant panda)   32 32
Canis_familiaris_69_3.1   (Dog)   46 46
Felis_catus_69   (Domestic cat)   34 25
Equus_caballus_69_2   (Horse)   30 30
Myotis_lucifugus_69_2.0   (Little brown bat)   31 31
Pteropus_vampyrus_69_1   (Large flying fox)   34 29
Sorex_araneus_69_1   (European shrew)   27 23
Erinaceus_europaeus_69   (Western European hedgehog)   27 22
Procavia_capensis_69_1   (Cape rock hyrax)   32 29
Loxodonta_africana_69_3   (African savanna elephant)   36 36
Echinops_telfairi_69   (Small Madagascar hedgehog)   32 28
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   52 43
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   26 22
Macropus_eugenii_69_1.0   (Tammar wallaby)   33 29
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   29 29
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   27 27
Ornithorhynchus_anatinus_69_5   (Platypus)   29 29
Petromyzon_marinus_69_7.0   (Sea lamprey)   8 8
Meleagris_gallopavo_69_2   (Turkey)   24 24
Gallus_gallus_69_2   (Chicken)   22 22
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   26 26
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   26 26
Anolis_carolinensis_69_2.0   (Green anole)   28 28
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   26 26
Latimeria_chalumnae_69_1   (Coelacanth)   30 29
Gadus_morhua_69_1   (Atlantic cod)   34 34
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   34 34
Takifugu_rubripes_69_4   (Torafugu)   33 33
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   36 36
Oryzias_latipes_69_1   (Japanese medaka)   33 33
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   33 33
Oreochromis_niloticus_69_1.0   (Nile tilapia)   37 37
Danio_rerio_69_9   (Zebrafish)   35 35
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   9 9
Ciona_intestinalis_69   (Vase tunicate)   10 10
Drosophila_melanogaster_69_5   (Fruit fly)   10 10
Caenorhabditis_elegans_69_215   (Roundworm)   8 8
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   5 4

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   170 170
Homo_sapiens__(NCBI_version)   (Human)   63 63
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   42 42
Loa_loa_v3.3_(Request)   (Eye worm)   10 10
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   11 11
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   8 8
Moniliophthora_perniciosa_FA553__(Genome_survey) 6 6
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
NCBI_viral_sequences_(Viral) 3 3
Protein_Data_Bank_(all_PDB_sequenc) 75 75
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 119 119
TargetDB__(Targets) 43 43
PDB_chains_(SCOP_1.75)_(PDB) 6 6
Protozoadb_2010_08_(Protozoadb) 225 225
STRING_v9.0.5_(STRING) 1451 1411
Uniprot_2018_03_genome 17240 16804
NCBI_2017_08_genome 25851 25638

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