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Enzyme Commission (EC): Protein-serine/threonine kinases  
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
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Root: EC Hierarchy (from IntEnz release 70)
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Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| alpha-D-mannose-specific plant lectins | 0 | DIRECT |
| Polygalacturonase inhibiting protein PGIP | 0 | DIRECT |
| RIO1-like kinases | 0 | DIRECT |
| LIM domain | 0 | DIRECT |
| Ssp2 C-terminal domain-like | 0 | DIRECT |
| alpha-ketoacid dehydrogenase kinase, N-terminal domain | 0 | DIRECT |
| Protein kinases, catalytic subunit | 0 | DIRECT |
| Myosin rod fragments | 0 | DIRECT |
| MAST3 pre-PK domain-like | 0 | DIRECT |
| L27 domain | 0 | DIRECT |
| Swapped Polo-box domain | 0 | DIRECT |
| Polo-box duplicated region | 0 | DIRECT |
| Calmodulin-like | 0 | DIRECT |
| Legume lectins | 0 | DIRECT |
| Doublecortin (DC) | 0 | DIRECT |
| beta-lactamase inhibitor protein-II, BLIP-II | 0 | DIRECT |
| FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0 | DIRECT |
| Ankyrin repeat | 0 | DIRECT |
| MHCK/EF2 kinase | 0 | DIRECT |
| Phoshoinositide 3-kinase (PI3K), catalytic domain | 0 | DIRECT |
| Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) | 0 | DIRECT |
| HR1 repeat | 0 | DIRECT |
| alpha-ketoacid dehydrogenase kinase, C-terminal domain | 0 | DIRECT |
| Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A | 0 | DIRECT |
| TAF(II)230 TBP-binding fragment | 0 | DIRECT |
| Kinase associated domain 1, KA1 | 0 | DIRECT |
| RhoA-binding domain | 0 | DIRECT |
| DEATH domain, DD | 0 | DIRECT |
| Extracellular domain of cell surface receptors | 0 | DIRECT |
| Pleckstrin-homology domain (PH domain) | 0 | DIRECT |
| Cyclin | 0 | DIRECT |
| Spectrin repeat | 0 | DIRECT |
| Synaptotagmin-like (S variant) | 0 | DIRECT |
| DBL homology domain (DH-domain) | 0 | DIRECT |
| Regulator of G-protein signaling, RGS | 0 | DIRECT |
| PLC-like (P variant) | 0 | DIRECT |
| Ras-binding domain, RBD | 5.532e-16 | DIRECT |
| RWD domain | 0.00000000000004253 | DIRECT |
| PB1 domain | 0.00000000000005117 | DIRECT |
| MIT domain | 0.0000000000003396 | DIRECT |
| cAMP-binding domain | 0.000000000001583 | DIRECT |
| FHA domain | 0.000000000002195 | DIRECT |
| Regulator of chromosome condensation RCC1 | 0.000000000007734 | DIRECT |
| Motor proteins | 0.00000000009439 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0.000000001231 | DIRECT |
| WD40-repeat | 0.0000001361 | DIRECT |
| BCR-homology GTPase activation domain (BH-domain) | 0.0000005076 | DIRECT |
| Chaperone J-domain | 0.000003068 | DIRECT |
| PDZ domain | 0.000006263 | DIRECT |
| Sulfatase-modifying factor-like | 0.00001494 | DIRECT |
| Tetratricopeptide repeat (TPR) | 0.00004023 | DIRECT |
| SH3-domain | 0.00009838 | DIRECT |
| UBA domain | 0.0001517 | DIRECT |
| I set domains | 0.0002304 | DIRECT |
| PX domain | 0.0003633 | DIRECT |
| Bromodomain | 0.002137 | INHERITED FROM: Non-specific serine/threonine protein kinase |
| Caspase recruitment domain, CARD | 0.002337 | INHERITED FROM: Non-specific serine/threonine protein kinase |
| Flavin-binding PAS domain | 0.003677 | INHERITED FROM: Non-specific serine/threonine protein kinase |
| Phoshoinositide 3-kinase (PI3K) helical domain | 0.1678 | INHERITED FROM: Non-specific serine/threonine protein kinase |
| Fibronectin type III | 0.2002 | INHERITED FROM: [Myosin light-chain] kinase |
| Histidine kinase | 0.2846 | INHERITED FROM: Non-specific serine/threonine protein kinase |
| SAM (sterile alpha motif) domain | 1 | INHERITED FROM: Mitogen-activated protein kinase kinase kinase |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| alpha-D-mannose-specific plant lectins | 0 | Direct |
| Polygalacturonase inhibiting protein PGIP | 0 | Direct |
| RIO1-like kinases | 0 | Direct |
| LIM domain | 0 | Direct |
| Ssp2 C-terminal domain-like | 0 | Direct |
| alpha-ketoacid dehydrogenase kinase, N-terminal domain | 0 | Direct |
| Protein kinases, catalytic subunit | 0 | Direct |
| Myosin rod fragments | 0 | Direct |
| MAST3 pre-PK domain-like | 0 | Direct |
| L27 domain | 0 | Direct |
| Swapped Polo-box domain | 0 | Direct |
| Polo-box duplicated region | 0 | Direct |
| Calmodulin-like | 0 | Direct |
| Legume lectins | 0 | Direct |
| Doublecortin (DC) | 0 | Direct |
| beta-lactamase inhibitor protein-II, BLIP-II | 0 | Direct |
| FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 0 | Direct |
| Ankyrin repeat | 0 | Direct |
| MHCK/EF2 kinase | 0 | Direct |
| Phoshoinositide 3-kinase (PI3K), catalytic domain | 0 | Direct |
| Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) | 0 | Direct |
| HR1 repeat | 0 | Direct |
| alpha-ketoacid dehydrogenase kinase, C-terminal domain | 0 | Direct |
| Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A | 0 | Direct |
| TAF(II)230 TBP-binding fragment | 0 | Direct |
| Kinase associated domain 1, KA1 | 0 | Direct |
| RhoA-binding domain | 0 | Direct |
| DEATH domain, DD | 0 | Direct |
| Extracellular domain of cell surface receptors | 0 | Direct |
| Pleckstrin-homology domain (PH domain) | 0 | Direct |
| Cyclin | 0 | Direct |
| Spectrin repeat | 0 | Direct |
| Synaptotagmin-like (S variant) | 0 | Direct |
| DBL homology domain (DH-domain) | 0 | Direct |
| Regulator of G-protein signaling, RGS | 0 | Direct |
| PLC-like (P variant) | 0 | Direct |
| Ras-binding domain, RBD | 5.532e-16 | Direct |
| RWD domain | 0.00000000000004253 | Direct |
| PB1 domain | 0.00000000000005117 | Direct |
| MIT domain | 0.0000000000003396 | Direct |
| cAMP-binding domain | 0.000000000001583 | Direct |
| FHA domain | 0.000000000002195 | Direct |
| Regulator of chromosome condensation RCC1 | 0.000000000007734 | Direct |
| Motor proteins | 0.00000000009439 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0.000000001231 | Direct |
| WD40-repeat | 0.0000001361 | Direct |
| BCR-homology GTPase activation domain (BH-domain) | 0.0000005076 | Direct |
| Chaperone J-domain | 0.000003068 | Direct |
| PDZ domain | 0.000006263 | Direct |
| Sulfatase-modifying factor-like | 0.00001494 | Direct |
| Tetratricopeptide repeat (TPR) | 0.00004023 | Direct |
| SH3-domain | 0.00009838 | Direct |
| UBA domain | 0.0001517 | Direct |
| I set domains | 0.0002304 | Direct |
| PX domain | 0.0003633 | Direct |
| Bromodomain | 0.002137 | Inherited |
| Caspase recruitment domain, CARD | 0.002337 | Inherited |
| Flavin-binding PAS domain | 0.003677 | Inherited |
| Phoshoinositide 3-kinase (PI3K) helical domain | 0.1678 | Inherited |
| Fibronectin type III | 0.2002 | Inherited |
| Histidine kinase | 0.2846 | Inherited |
| SAM (sterile alpha motif) domain | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
56112,103243 56112 - Protein kinase-like (PK-like) 103243 - KA1-like | 0 | DIRECT |
56112,54427 56112 - Protein kinase-like (PK-like) 54427 - NTF2-like | 0 | DIRECT |
56112,50729 56112 - Protein kinase-like (PK-like) 50729 - PH domain-like | 0 | DIRECT |
56112,48403 56112 - Protein kinase-like (PK-like) 48403 - Ankyrin repeat | 0 | DIRECT |
51110,51110 51110 - alpha-D-mannose-specific plant lectins 51110 - alpha-D-mannose-specific plant lectins | 0 | DIRECT |
48097,56112 48097 - Regulator of G-protein signaling, RGS 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
49562,57889 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 57889 - Cysteine-rich domain | 0 | DIRECT |
48403,56112 48403 - Ankyrin repeat 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,116846 56112 - Protein kinase-like (PK-like) 116846 - MIT domain | 0 | DIRECT |
101288,101288 101288 - L27 domain 101288 - L27 domain | 0 | DIRECT |
82615,82615 82615 - Polo-box domain 82615 - Polo-box domain | 0 | DIRECT |
46785,56112 46785 - "Winged helix" DNA-binding domain 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,50978 56112 - Protein kinase-like (PK-like) 50978 - WD40 repeat-like | 0 | DIRECT |
55073,56112 55073 - Nucleotide cyclase 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
46585,49562 46585 - HR1 repeat 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
89837,89837 89837 - Doublecortin (DC) 89837 - Doublecortin (DC) | 0 | DIRECT |
57889,57889 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain | 0 | DIRECT |
46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | DIRECT |
69012,55874 69012 - alpha-ketoacid dehydrogenase kinase, N-terminal domain 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
52087,46966 52087 - CRAL/TRIO domain 46966 - Spectrin repeat | 0 | DIRECT |
52058,52540 52058 - L domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47212,56112 47212 - FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
50156,50044 50156 - PDZ domain-like 50044 - SH3-domain | 0 | DIRECT |
52058,52047 52058 - L domain-like 52047 - RNI-like | 0 | DIRECT |
57889,49562 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
50156,56112 50156 - PDZ domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
57889,50729 57889 - Cysteine-rich domain 50729 - PH domain-like | 0 | DIRECT |
56112,47473 56112 - Protein kinase-like (PK-like) 47473 - EF-hand | 0 | DIRECT |
116846,116846 116846 - MIT domain 116846 - MIT domain | 0 | DIRECT |
49562,48350 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48350 - GTPase activation domain, GAP | 0 | DIRECT |
56112,52799 56112 - Protein kinase-like (PK-like) 52799 - (Phosphotyrosine protein) phosphatases II | 0 | DIRECT |
54236,57889 54236 - Ubiquitin-like 57889 - Cysteine-rich domain | 0 | DIRECT |
50044,56112 50044 - SH3-domain 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
53067,56112 53067 - Actin-like ATPase domain 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
48065,50729 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0 | DIRECT |
50729,69322 50729 - PH domain-like 69322 - Tricorn protease domain 2 | 0 | DIRECT |
49899,56112 49899 - Concanavalin A-like lectins/glucanases 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
50044,52540 50044 - SH3-domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56112,101288 56112 - Protein kinase-like (PK-like) 101288 - L27 domain | 0 | DIRECT |
56112,48726 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin | 0 | DIRECT |
52047,52058 52047 - RNI-like 52058 - L domain-like | 0 | DIRECT |
54277,57889 54277 - CAD & PB1 domains 57889 - Cysteine-rich domain | 0 | DIRECT |
50729,56112 50729 - PH domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52058,52058 52058 - L domain-like 52058 - L domain-like | 0 | DIRECT |
49562,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52047,52047 52047 - RNI-like 52047 - RNI-like | 0 | DIRECT |
48371,48371 48371 - ARM repeat 48371 - ARM repeat | 0 | DIRECT |
56112,90257 56112 - Protein kinase-like (PK-like) 90257 - Myosin rod fragments | 0 | DIRECT |
57716,50156 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like | 0 | DIRECT |
47986,56112 47986 - DEATH domain 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
48726,56112 48726 - Immunoglobulin 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52058,56112 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | DIRECT |
56112,50998 56112 - Protein kinase-like (PK-like) 50998 - Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
50998,56112 50998 - Quinoprotein alcohol dehydrogenase-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,54928 56112 - Protein kinase-like (PK-like) 54928 - RNA-binding domain, RBD | 0 | DIRECT |
101288,50156 101288 - L27 domain 50156 - PDZ domain-like | 0 | DIRECT |
46585,46585 46585 - HR1 repeat 46585 - HR1 repeat | 0 | DIRECT |
53850,56112 53850 - Periplasmic binding protein-like II 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
50044,48065 50044 - SH3-domain 48065 - DBL homology domain (DH-domain) | 0 | DIRECT |
52047,56112 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
47370,47370 47370 - Bromodomain 47370 - Bromodomain | 0 | DIRECT |
51206,56112 51206 - cAMP-binding domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
81995,56112 81995 - beta-sandwich domain of Sec23/24 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,50985 56112 - Protein kinase-like (PK-like) 50985 - RCC1/BLIP-II | 0 | DIRECT |
56112,55681 56112 - Protein kinase-like (PK-like) 55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
56112,48452 56112 - Protein kinase-like (PK-like) 48452 - TPR-like | 0 | DIRECT |
64268,56112 64268 - PX domain 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
-9,-7 -9 - PDB -7 - CATH | 0 | DIRECT |
56112,82615 56112 - Protein kinase-like (PK-like) 82615 - Polo-box domain | 0 | DIRECT |
57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.000000000000003506 | DIRECT |
49879,56112 49879 - SMAD/FHA domain 56112 - Protein kinase-like (PK-like) | 0.0000000000004242 | DIRECT |
56112,56112 56112 - Protein kinase-like (PK-like) 56112 - Protein kinase-like (PK-like) | 0.0000000000007233 | DIRECT |
49265,56112 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) | 0.0000000000007552 | DIRECT |
51206,51206 51206 - cAMP-binding domain-like 51206 - cAMP-binding domain-like | 0.00000000002334 | DIRECT |
48726,49265 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.000000006698 | DIRECT |
49265,48726 49265 - Fibronectin type III 48726 - Immunoglobulin | 0.00000001183 | DIRECT |
-7,56112 -7 - CATH 56112 - Protein kinase-like (PK-like) | 0.000004908 | DIRECT |
48403,47769 48403 - Ankyrin repeat 47769 - SAM/Pointed domain | 0.00000552 | DIRECT |
50729,57889 50729 - PH domain-like 57889 - Cysteine-rich domain | 0.000007771 | DIRECT |
54768,54768 54768 - dsRNA-binding domain-like 54768 - dsRNA-binding domain-like | 0.00001078 | DIRECT |
50729,50044 50729 - PH domain-like 50044 - SH3-domain | 0.00002623 | DIRECT |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.00004757 | DIRECT |
56112,50044 56112 - Protein kinase-like (PK-like) 50044 - SH3-domain | 0.000116 | DIRECT |
52799,49562 52799 - (Phosphotyrosine protein) phosphatases II 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0001818 | DIRECT |
48371,56112 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0.0007725 | DIRECT |
56112,52540 56112 - Protein kinase-like (PK-like) 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.001409 | INHERITED FROM: Non-specific serine/threonine protein kinase |
53850,53850 53850 - Periplasmic binding protein-like II 53850 - Periplasmic binding protein-like II | 0.01388 | INHERITED FROM: Non-specific serine/threonine protein kinase |
57850,48371 57850 - RING/U-box 48371 - ARM repeat | 0.01946 | INHERITED FROM: Mitogen-activated protein kinase kinase kinase |
49562,48371 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat | 0.08866 | INHERITED FROM: Non-specific serine/threonine protein kinase |
48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.4463 | INHERITED FROM: [Myosin light-chain] kinase |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
56112,103243 56112 - Protein kinase-like (PK-like) 103243 - KA1-like | 0 | Direct |
56112,54427 56112 - Protein kinase-like (PK-like) 54427 - NTF2-like | 0 | Direct |
56112,50729 56112 - Protein kinase-like (PK-like) 50729 - PH domain-like | 0 | Direct |
56112,48403 56112 - Protein kinase-like (PK-like) 48403 - Ankyrin repeat | 0 | Direct |
51110,51110 51110 - alpha-D-mannose-specific plant lectins 51110 - alpha-D-mannose-specific plant lectins | 0 | Direct |
48097,56112 48097 - Regulator of G-protein signaling, RGS 56112 - Protein kinase-like (PK-like) | 0 | Direct |
49562,57889 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 57889 - Cysteine-rich domain | 0 | Direct |
48403,56112 48403 - Ankyrin repeat 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,116846 56112 - Protein kinase-like (PK-like) 116846 - MIT domain | 0 | Direct |
101288,101288 101288 - L27 domain 101288 - L27 domain | 0 | Direct |
82615,82615 82615 - Polo-box domain 82615 - Polo-box domain | 0 | Direct |
46785,56112 46785 - "Winged helix" DNA-binding domain 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,50978 56112 - Protein kinase-like (PK-like) 50978 - WD40 repeat-like | 0 | Direct |
55073,56112 55073 - Nucleotide cyclase 56112 - Protein kinase-like (PK-like) | 0 | Direct |
46585,49562 46585 - HR1 repeat 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
89837,89837 89837 - Doublecortin (DC) 89837 - Doublecortin (DC) | 0 | Direct |
57889,57889 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain | 0 | Direct |
46966,46966 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | Direct |
69012,55874 69012 - alpha-ketoacid dehydrogenase kinase, N-terminal domain 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
52087,46966 52087 - CRAL/TRIO domain 46966 - Spectrin repeat | 0 | Direct |
52058,52540 52058 - L domain-like 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47212,56112 47212 - FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 56112 - Protein kinase-like (PK-like) | 0 | Direct |
50156,50044 50156 - PDZ domain-like 50044 - SH3-domain | 0 | Direct |
52058,52047 52058 - L domain-like 52047 - RNI-like | 0 | Direct |
57889,49562 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
50156,56112 50156 - PDZ domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
57889,50729 57889 - Cysteine-rich domain 50729 - PH domain-like | 0 | Direct |
56112,47473 56112 - Protein kinase-like (PK-like) 47473 - EF-hand | 0 | Direct |
116846,116846 116846 - MIT domain 116846 - MIT domain | 0 | Direct |
49562,48350 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48350 - GTPase activation domain, GAP | 0 | Direct |
56112,52799 56112 - Protein kinase-like (PK-like) 52799 - (Phosphotyrosine protein) phosphatases II | 0 | Direct |
54236,57889 54236 - Ubiquitin-like 57889 - Cysteine-rich domain | 0 | Direct |
50044,56112 50044 - SH3-domain 56112 - Protein kinase-like (PK-like) | 0 | Direct |
53067,56112 53067 - Actin-like ATPase domain 56112 - Protein kinase-like (PK-like) | 0 | Direct |
48065,50729 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0 | Direct |
50729,69322 50729 - PH domain-like 69322 - Tricorn protease domain 2 | 0 | Direct |
49899,56112 49899 - Concanavalin A-like lectins/glucanases 56112 - Protein kinase-like (PK-like) | 0 | Direct |
50044,52540 50044 - SH3-domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56112,101288 56112 - Protein kinase-like (PK-like) 101288 - L27 domain | 0 | Direct |
56112,48726 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin | 0 | Direct |
52047,52058 52047 - RNI-like 52058 - L domain-like | 0 | Direct |
54277,57889 54277 - CAD & PB1 domains 57889 - Cysteine-rich domain | 0 | Direct |
50729,56112 50729 - PH domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52058,52058 52058 - L domain-like 52058 - L domain-like | 0 | Direct |
49562,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52047,52047 52047 - RNI-like 52047 - RNI-like | 0 | Direct |
48371,48371 48371 - ARM repeat 48371 - ARM repeat | 0 | Direct |
56112,90257 56112 - Protein kinase-like (PK-like) 90257 - Myosin rod fragments | 0 | Direct |
57716,50156 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like | 0 | Direct |
47986,56112 47986 - DEATH domain 56112 - Protein kinase-like (PK-like) | 0 | Direct |
48726,56112 48726 - Immunoglobulin 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52058,56112 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,48371 56112 - Protein kinase-like (PK-like) 48371 - ARM repeat | 0 | Direct |
56112,50998 56112 - Protein kinase-like (PK-like) 50998 - Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
50998,56112 50998 - Quinoprotein alcohol dehydrogenase-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,54928 56112 - Protein kinase-like (PK-like) 54928 - RNA-binding domain, RBD | 0 | Direct |
101288,50156 101288 - L27 domain 50156 - PDZ domain-like | 0 | Direct |
46585,46585 46585 - HR1 repeat 46585 - HR1 repeat | 0 | Direct |
53850,56112 53850 - Periplasmic binding protein-like II 56112 - Protein kinase-like (PK-like) | 0 | Direct |
50044,48065 50044 - SH3-domain 48065 - DBL homology domain (DH-domain) | 0 | Direct |
52047,56112 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
47370,47370 47370 - Bromodomain 47370 - Bromodomain | 0 | Direct |
51206,56112 51206 - cAMP-binding domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
81995,56112 81995 - beta-sandwich domain of Sec23/24 56112 - Protein kinase-like (PK-like) | 0 | Direct |
55021,56112 55021 - ACT-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,50985 56112 - Protein kinase-like (PK-like) 50985 - RCC1/BLIP-II | 0 | Direct |
56112,55681 56112 - Protein kinase-like (PK-like) 55681 - Class II aaRS and biotin synthetases | 0 | Direct |
56112,48452 56112 - Protein kinase-like (PK-like) 48452 - TPR-like | 0 | Direct |
64268,56112 64268 - PX domain 56112 - Protein kinase-like (PK-like) | 0 | Direct |
-9,-7 -9 - PDB -7 - CATH | 0 | Direct |
56112,82615 56112 - Protein kinase-like (PK-like) 82615 - Polo-box domain | 0 | Direct |
57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0.000000000000003506 | Direct |
49879,56112 49879 - SMAD/FHA domain 56112 - Protein kinase-like (PK-like) | 0.0000000000004242 | Direct |
56112,56112 56112 - Protein kinase-like (PK-like) 56112 - Protein kinase-like (PK-like) | 0.0000000000007233 | Direct |
49265,56112 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) | 0.0000000000007552 | Direct |
51206,51206 51206 - cAMP-binding domain-like 51206 - cAMP-binding domain-like | 0.00000000002334 | Direct |
48726,49265 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.000000006698 | Direct |
49265,48726 49265 - Fibronectin type III 48726 - Immunoglobulin | 0.00000001183 | Direct |
-7,56112 -7 - CATH 56112 - Protein kinase-like (PK-like) | 0.000004908 | Direct |
48403,47769 48403 - Ankyrin repeat 47769 - SAM/Pointed domain | 0.00000552 | Direct |
50729,57889 50729 - PH domain-like 57889 - Cysteine-rich domain | 0.000007771 | Direct |
54768,54768 54768 - dsRNA-binding domain-like 54768 - dsRNA-binding domain-like | 0.00001078 | Direct |
50729,50044 50729 - PH domain-like 50044 - SH3-domain | 0.00002623 | Direct |
48403,52540 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.00004757 | Direct |
56112,50044 56112 - Protein kinase-like (PK-like) 50044 - SH3-domain | 0.000116 | Direct |
52799,49562 52799 - (Phosphotyrosine protein) phosphatases II 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0001818 | Direct |
48371,56112 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0.0007725 | Direct |
56112,52540 56112 - Protein kinase-like (PK-like) 52540 - P-loop containing nucleoside triphosphate hydrolases | 0.001409 | Inherited |
53850,53850 53850 - Periplasmic binding protein-like II 53850 - Periplasmic binding protein-like II | 0.01388 | Inherited |
57850,48371 57850 - RING/U-box 48371 - ARM repeat | 0.01946 | Inherited |
49562,48371 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat | 0.08866 | Inherited |
48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.4463 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
56112,48403,52540 56112 - Protein kinase-like (PK-like) 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52047,52047,56112 52047 - RNI-like 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52047,52047,52058 52047 - RNI-like 52047 - RNI-like 52058 - L domain-like | 0 | DIRECT |
57716,57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
52058,52058,56112 52058 - L domain-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
57889,49562,56112 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
48726,49265,48726 48726 - Immunoglobulin 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | DIRECT |
57889,57889,49562 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
48097,56112,50729 48097 - Regulator of G-protein signaling, RGS 56112 - Protein kinase-like (PK-like) 50729 - PH domain-like | 0 | DIRECT |
46585,46585,46585 46585 - HR1 repeat 46585 - HR1 repeat 46585 - HR1 repeat | 0 | DIRECT |
48065,50729,50044 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like 50044 - SH3-domain | 0 | DIRECT |
101288,50156,50044 101288 - L27 domain 50156 - PDZ domain-like 50044 - SH3-domain | 0 | DIRECT |
57716,50156,56112 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
101288,101288,50156 101288 - L27 domain 101288 - L27 domain 50156 - PDZ domain-like | 0 | DIRECT |
56112,82615,82615 56112 - Protein kinase-like (PK-like) 82615 - Polo-box domain 82615 - Polo-box domain | 0 | DIRECT |
52047,52058,56112 52047 - RNI-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
49562,57889,57889 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain | 0 | DIRECT |
57889,50729,69322 57889 - Cysteine-rich domain 50729 - PH domain-like 69322 - Tricorn protease domain 2 | 0 | DIRECT |
56112,101288,101288 56112 - Protein kinase-like (PK-like) 101288 - L27 domain 101288 - L27 domain | 0 | DIRECT |
56112,116846,116846 56112 - Protein kinase-like (PK-like) 116846 - MIT domain 116846 - MIT domain | 0 | DIRECT |
50156,50044,52540 50156 - PDZ domain-like 50044 - SH3-domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51206,51206,56112 51206 - cAMP-binding domain-like 51206 - cAMP-binding domain-like 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
48726,49265,56112 48726 - Immunoglobulin 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
56112,48726,48726 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin 48726 - Immunoglobulin | 0 | DIRECT |
49265,56112,48726 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin | 0 | DIRECT |
56112,52799,49562 56112 - Protein kinase-like (PK-like) 52799 - (Phosphotyrosine protein) phosphatases II 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
48726,48726,56112 48726 - Immunoglobulin 48726 - Immunoglobulin 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52087,46966,46966 52087 - CRAL/TRIO domain 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | DIRECT |
-9,-7,56112 -9 - PDB -7 - CATH 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
49265,48726,49265 49265 - Fibronectin type III 48726 - Immunoglobulin 49265 - Fibronectin type III | 0 | DIRECT |
50044,48065,50729 50044 - SH3-domain 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0 | DIRECT |
53850,53850,56112 53850 - Periplasmic binding protein-like II 53850 - Periplasmic binding protein-like II 56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52058,52047,52058 52058 - L domain-like 52047 - RNI-like 52058 - L domain-like | 0 | DIRECT |
57716,57716,50156 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like | 0 | DIRECT |
52058,52058,52058 52058 - L domain-like 52058 - L domain-like 52058 - L domain-like | 0.000000000009925 | DIRECT |
52058,52047,56112 52058 - L domain-like 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0.0000000001983 | DIRECT |
48726,48726,49265 48726 - Immunoglobulin 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.00000009997 | DIRECT |
49265,48726,48726 49265 - Fibronectin type III 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.0000007051 | DIRECT |
49562,48371,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0.07743 | INHERITED FROM: Non-specific serine/threonine protein kinase |
48726,48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.1502 | INHERITED FROM: [Myosin light-chain] kinase |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
56112,48403,52540 56112 - Protein kinase-like (PK-like) 48403 - Ankyrin repeat 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52047,52047,56112 52047 - RNI-like 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52047,52047,52058 52047 - RNI-like 52047 - RNI-like 52058 - L domain-like | 0 | Direct |
57716,57716,57716 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
52058,52058,56112 52058 - L domain-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
57889,49562,56112 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 56112 - Protein kinase-like (PK-like) | 0 | Direct |
48726,49265,48726 48726 - Immunoglobulin 49265 - Fibronectin type III 48726 - Immunoglobulin | 0 | Direct |
57889,57889,49562 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
48097,56112,50729 48097 - Regulator of G-protein signaling, RGS 56112 - Protein kinase-like (PK-like) 50729 - PH domain-like | 0 | Direct |
46585,46585,46585 46585 - HR1 repeat 46585 - HR1 repeat 46585 - HR1 repeat | 0 | Direct |
48065,50729,50044 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like 50044 - SH3-domain | 0 | Direct |
101288,50156,50044 101288 - L27 domain 50156 - PDZ domain-like 50044 - SH3-domain | 0 | Direct |
57716,50156,56112 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
101288,101288,50156 101288 - L27 domain 101288 - L27 domain 50156 - PDZ domain-like | 0 | Direct |
56112,82615,82615 56112 - Protein kinase-like (PK-like) 82615 - Polo-box domain 82615 - Polo-box domain | 0 | Direct |
52047,52058,56112 52047 - RNI-like 52058 - L domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
49562,57889,57889 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 57889 - Cysteine-rich domain 57889 - Cysteine-rich domain | 0 | Direct |
57889,50729,69322 57889 - Cysteine-rich domain 50729 - PH domain-like 69322 - Tricorn protease domain 2 | 0 | Direct |
56112,101288,101288 56112 - Protein kinase-like (PK-like) 101288 - L27 domain 101288 - L27 domain | 0 | Direct |
56112,116846,116846 56112 - Protein kinase-like (PK-like) 116846 - MIT domain 116846 - MIT domain | 0 | Direct |
50156,50044,52540 50156 - PDZ domain-like 50044 - SH3-domain 52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51206,51206,56112 51206 - cAMP-binding domain-like 51206 - cAMP-binding domain-like 56112 - Protein kinase-like (PK-like) | 0 | Direct |
48726,49265,56112 48726 - Immunoglobulin 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) | 0 | Direct |
56112,48726,48726 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin 48726 - Immunoglobulin | 0 | Direct |
49265,56112,48726 49265 - Fibronectin type III 56112 - Protein kinase-like (PK-like) 48726 - Immunoglobulin | 0 | Direct |
56112,52799,49562 56112 - Protein kinase-like (PK-like) 52799 - (Phosphotyrosine protein) phosphatases II 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
48726,48726,56112 48726 - Immunoglobulin 48726 - Immunoglobulin 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52087,46966,46966 52087 - CRAL/TRIO domain 46966 - Spectrin repeat 46966 - Spectrin repeat | 0 | Direct |
-9,-7,56112 -9 - PDB -7 - CATH 56112 - Protein kinase-like (PK-like) | 0 | Direct |
49265,48726,49265 49265 - Fibronectin type III 48726 - Immunoglobulin 49265 - Fibronectin type III | 0 | Direct |
50044,48065,50729 50044 - SH3-domain 48065 - DBL homology domain (DH-domain) 50729 - PH domain-like | 0 | Direct |
53850,53850,56112 53850 - Periplasmic binding protein-like II 53850 - Periplasmic binding protein-like II 56112 - Protein kinase-like (PK-like) | 0 | Direct |
52058,52047,52058 52058 - L domain-like 52047 - RNI-like 52058 - L domain-like | 0 | Direct |
57716,57716,50156 57716 - Glucocorticoid receptor-like (DNA-binding domain) 57716 - Glucocorticoid receptor-like (DNA-binding domain) 50156 - PDZ domain-like | 0 | Direct |
52058,52058,52058 52058 - L domain-like 52058 - L domain-like 52058 - L domain-like | 0.000000000009925 | Direct |
52058,52047,56112 52058 - L domain-like 52047 - RNI-like 56112 - Protein kinase-like (PK-like) | 0.0000000001983 | Direct |
48726,48726,49265 48726 - Immunoglobulin 48726 - Immunoglobulin 49265 - Fibronectin type III | 0.00000009997 | Direct |
49265,48726,48726 49265 - Fibronectin type III 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.0000007051 | Direct |
49562,48371,56112 49562 - C2 domain (Calcium/lipid-binding domain, CaLB) 48371 - ARM repeat 56112 - Protein kinase-like (PK-like) | 0.07743 | Inherited |
48726,48726,48726 48726 - Immunoglobulin 48726 - Immunoglobulin 48726 - Immunoglobulin | 0.1502 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this EC term
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Plot tree as:
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Download Newick format tree:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this EC term
 |
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
  
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