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CTD Chemicals (CC): Polyamines 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: CC Hierarchy (CTD chemicals from Comparative Toxicogenomics Database)
| Shortest distance to current term (+ for parents, - for children) |
CC term [CC ID] <#Children> |
#Domains (Superfamily|Family) |
#Supra-domain (Single|Duplex|Triple) |
| + + + 3: | Chemicals [MESH:D] <13> |
| + + 2: | Organic Chemicals [MESH:D009930] <621> | (617|829) |
(620|532|254) |
| + 1: | Amines [MESH:D000588] <138> | (228|283) |
(235|204|110) |
| 0: | Polyamines [MESH:D011073] <174> | (46|49) |
(47|21|7) |
| - 1: | Diamines [MESH:D003959] <160> | (46|48) |
(47|21|7) |
| - 1: | Pentetic Acid [MESH:D004369] <119> | (2|1) |
(2|0|0) |
| - 1: | Spermine [MESH:D013096] <86> | (2|0) |
(2|0|0) |
| - 1: | Spermidine [MESH:D013095] <85> | (2|0) |
(2|0|0) |
| - 1: | Methenamine [MESH:D008709] <11> | (0|0) |
(0|0|0) |
| - 1: | (8S,18S)-1,4,10,13,16-pentaaza-tricyclo (16.3. 0.04(4,8)) heneicosane-9,17-dione [MESH:C549862] | (0|0) |
(0|0|0) |
| - 1: | 1,1,4-trimethyldiethylenetrimine [MESH:C012084] | (0|0) |
(0|0|0) |
| - 1: | 1,15-bis(N-(o-phenyl)benzylamino)-4,12-diazapentadecane [MESH:C541530] | (0|0) |
(0|0|0) |
| - 1: | 1,15-bis(ethylamino)-4,12-diazapentadecane [MESH:C106387] | (0|0) |
(0|0|0) |
| - 1: | 1,15-bis(ethylamino)-4,8,12-triazapentadecane [MESH:C094172] | (0|0) |
(0|0|0) |
| - 1: | 1,21-diamino-4,9,13,18-tetraazahenicosane [MESH:C122152] | (0|0) |
(0|0|0) |
| - 1: | 1,3,6-triaminohexane [MESH:C048364] | (0|0) |
(0|0|0) |
| - 1: | 1,4,7-triaminoheptane [MESH:C048363] | (0|0) |
(0|0|0) |
| - 1: | 1,5,9,13,17,21,25,29-octaazacyclodotriacontane [MESH:C522301] | (0|0) |
(0|0|0) |
| - 1: | 1,7-bis(2-hydroxybenzyl)-4-(4-aminobenzyl)diethylenetriamine [MESH:C069115] | (0|0) |
(0|0|0) |
| - 1: | 1-aminooxy-3-N-(3-aminopropyl)aminopropane [MESH:C091685] | (0|0) |
(0|0|0) |
| - 1: | 13-phenyl-(8S,18S)-1,4,10,13,16-pentaaza-tricyclo (16.3. 0.0(4,8)) heneicosane-9,17-dione [MESH:C549863] | (0|0) |
(0|0|0) |
| - 1: | 2,10-dioximino-3,9-dimethyl-4,8-diazaundeca-3,8-diene [MESH:C115518] | (0|0) |
(0|0|0) |
| - 1: | 2,3,2-tetramine [MESH:C022177] | (0|0) |
(0|0|0) |
| - 1: | 2-(2-(1H-indol-3-yl)acetamido)-N1-(5-(3-(4-(3-aminopropylamino)butylamino)propanamido)pentyl)succina [MESH:C577966] | (0|0) |
(0|0|0) |
| - 1: | 3,3'-diamino-N-methyldipropylamine [MESH:C000602661] | (0|0) |
(0|0|0) |
| - 1: | 3,3'-methyliminobis(N-methylpropylamine) [MESH:C033506] | (0|0) |
(0|0|0) |
| - 1: | 3,3,11,11-tetramethyl-7-benzyl-4,7,10-triazatridecane-2,12-dionedioxime [MESH:C092287] | (0|0) |
(0|0|0) |
| - 1: | 3,8,13,18-tetraaza-10,11-((E)-1,2-cyclopropyl)eicosane tetrahydrochloride [MESH:C475839] | (0|0) |
(0|0|0) |
| - 1: | 6-deoxy-6-(2-bis(N',N'-(2-aminoethyl))aminoethyl)amino cellulose carbamate [MESH:C000608858] | (0|0) |
(0|0|0) |
| - 1: | 7-methoxy-2-oxo-2H-chromene-3-carboxylic acid(3-(6-(8-(6-(2-methoxybenzylamino)hexylamino)octylamino [MESH:C453999] | (0|0) |
(0|0|0) |
| - 1: | AGMA1 polymer [MESH:C521880] | (0|0) |
(0|0|0) |
| - 1: | APL PolyCat57 [MESH:C107066] | (0|0) |
(0|0|0) |
| - 1: | Acramin FWN [MESH:C088846] | (0|0) |
(0|0|0) |
| - 1: | Agel-489 [MESH:C419451] | (0|0) |
(0|0|0) |
| - 1: | Ampholine [MESH:C002023] | (0|0) |
(0|0|0) |
| - 1: | BU36b polyamine [MESH:C511984] | (0|0) |
(0|0|0) |
| - 1: | BU43b polyamine [MESH:C511983] | (0|0) |
(0|0|0) |
| - 1: | CGC 11047 [MESH:C515675] | (0|0) |
(0|0|0) |
| - 1: | CGC 11093 [MESH:C515676] | (0|0) |
(0|0|0) |
| - 1: | CGC 11179 [MESH:C512143] | (0|0) |
(0|0|0) |
| - 1: | Colestipol [MESH:D003084] | (0|0) |
(0|0|0) |
| - 1: | Cyclams [MESH:D000080027] | (0|0) |
(0|0|0) |
| - 1: | EPO 60 [MESH:C074313] | (0|0) |
(0|0|0) |
| - 1: | EVK-203 [MESH:C523024] | (0|0) |
(0|0|0) |
| - 1: | FTX 3.3 [MESH:C102391] | (0|0) |
(0|0|0) |
| - 1: | FTX, spider toxin [MESH:C071920] | (0|0) |
(0|0|0) |
| - 1: | GT 16-239 [MESH:C117464] | (0|0) |
(0|0|0) |
| - 1: | HO 416b [MESH:C410205] | (0|0) |
(0|0|0) |
| - 1: | Het 403 toxin [MESH:C065318] | (0|0) |
(0|0|0) |
| - 1: | Hexadimethrine Bromide [MESH:D006583] | (0|0) |
(0|0|0) |
| - 1: | ISA23 polymer [MESH:C496056] | (0|0) |
(0|0|0) |
| - 1: | JSTX-3 [MESH:C426070] | (0|0) |
(0|0|0) |
| - 1: | LY 310315 [MESH:C119505] | (0|0) |
(0|0|0) |
| - 1: | Lys01 [MESH:C573930] | (0|0) |
(0|0|0) |
| - 1: | MBC 115 [MESH:C110686] | (0|0) |
(0|0|0) |
| - 1: | MDL 27695 [MESH:C058294] | (0|0) |
(0|0|0) |
| - 1: | MDL 28302 [MESH:C083871] | (0|0) |
(0|0|0) |
| - 1: | MDL 29431 [MESH:C083870] | (0|0) |
(0|0|0) |
| - 1: | MOTU-N44 compound [MESH:C000618845] | (0|0) |
(0|0|0) |
| - 1: | N'-(3-aminopropyl)homospermidine [MESH:C054801] | (0|0) |
(0|0|0) |
| - 1: | N(1)-(quinolin-2-ylmethyl)butane-1,4-diamine [MESH:C579386] | (0|0) |
(0|0|0) |
| - 1: | N(1)-ethyl-N(11)-(cyclobutyl)methyl-4,8-diazaundecane-1,11-diamine [MESH:C093141] | (0|0) |
(0|0|0) |
| - 1: | N(1)-ethyl-N(11)-propargyl-4,8-diazaundecane-1,11-diamine [MESH:C083628] | (0|0) |
(0|0|0) |
| - 1: | N(1)-ethyl-N-(11)-((cycloheptyl)methyl)-4,8-diazaundecane [MESH:C118771] | (0|0) |
(0|0|0) |
| - 1: | N(1)-ethyl-N-(11)-((cyclopropyl)methyl)-4,8-diazaundecane-1,11-diamine [MESH:C083629] | (0|0) |
(0|0|0) |
| - 1: | N(1)-ethyl-N-(11)-(2-methyl-1-butyl)-4,8-diazaundecane [MESH:C118772] | (0|0) |
(0|0|0) |
| - 1: | N,N''-bis(6-methoxy-2-quinolylmethyl)diethylenetriamine [MESH:C560105] | (0|0) |
(0|0|0) |
| - 1: | N,N',N''-triferuloylspermidine [MESH:C436356] | (0|0) |
(0|0|0) |
| - 1: | N,N'-bis-(3-aminopropyl) cyclohexane-1,4-diamine [MESH:C508894] | (0|0) |
(0|0|0) |
| - 1: | N,N'-bis-(3-aminopropyl)cyclohexane-1,4-diamine, tetramethanesulfonate [MESH:C504396] | (0|0) |
(0|0|0) |
| - 1: | N,N'-di-(3-((phenylmethyl)amino)propyl)-1,8-diaminooctane [MESH:C061495] | (0|0) |
(0|0|0) |
| - 1: | N,N,N',N'',N''-pentamethyldiethylenetriamine [MESH:C554858] | (0|0) |
(0|0|0) |
| - 1: | N,N-bis(2-aminoethyl)-1,3-propanediamine [MESH:C064279] | (0|0) |
(0|0|0) |
| - 1: | N,N-bis(naphthylideneimino)diethylenetriamine [MESH:C547174] | (0|0) |
(0|0|0) |
| - 1: | N-(2-aminoethyl)-1,4-diaminobutane [MESH:C069659] | (0|0) |
(0|0|0) |
| - 1: | N-(3-((2-ammonioethyl)amino)propyl)ethane-1,2-diaminium tris(trifluoromethanesulfonate) [MESH:C532185] | (0|0) |
(0|0|0) |
| - 1: | N-(3-trimethoxysilylpropyl)diethylenetriamine [MESH:C575344] | (0|0) |
(0|0|0) |
| - 1: | N1,N1',N1''-(benzene-1,3,5-triyltris(methylene))tris(N4-(4-(methylamino)butyl)butane-1,4-diamine [MESH:C000608809] | (0|0) |
(0|0|0) |
| - 1: | N1,N8-bis(l-methyl-4-nitropyrrole-2-carbonyl)triethylenetetramine [MESH:C518372] | (0|0) |
(0|0|0) |
| - 1: | N2LL poly(amido-amine) [MESH:C045687] | (0|0) |
(0|0|0) |
| - 1: | N2LL poly(amido-amine)-polyurethane copolymer [MESH:C074348] | (0|0) |
(0|0|0) |
| - 1: | NNAMB compound [MESH:C548263] | (0|0) |
(0|0|0) |
| - 1: | NPC 16 [MESH:C559142] | (0|0) |
(0|0|0) |
| - 1: | NPTX-594 [MESH:C540561] | (0|0) |
(0|0|0) |
| - 1: | NSTX-3 [MESH:C426071] | (0|0) |
(0|0|0) |
| - 1: | PAMAM-G6-cystamine-(Gd-DO3A) [MESH:C523481] | (0|0) |
(0|0|0) |
| - 1: | PEI-PAMAM [MESH:C520551] | (0|0) |
(0|0|0) |
| - 1: | PEN 110 [MESH:C451719] | (0|0) |
(0|0|0) |
| - 1: | Poly(amidoamine) [MESH:C531249] | (0|0) |
(0|0|0) |
| - 1: | RE 1492 [MESH:C067017] | (0|0) |
(0|0|0) |
| - 1: | SL-11158 [MESH:C465646] | (0|0) |
(0|0|0) |
| - 1: | SL11144 [MESH:C483830] | (0|0) |
(0|0|0) |
| - 1: | Sevelamer [MESH:D000069603] | (0|0) |
(0|0|0) |
| - 1: | Tetronic 1307 [MESH:C000610401] | (0|0) |
(0|0|0) |
| - 1: | WR 149024 [MESH:C023765] | (0|0) |
(0|0|0) |
| - 1: | abouthiouzine [MESH:C503245] | (0|0) |
(0|0|0) |
| - 1: | agatoxin-489 [MESH:C076532] | (0|0) |
(0|0|0) |
| - 1: | allylamine-N-dodecylallylamine-N-(purin-6-yl) allylamine copolymer [MESH:C103595] | (0|0) |
(0|0|0) |
| - 1: | alpha,beta-poly(N-2-hydroxyethyl)(2-aminoethylcarbamate)-d,l-aspartamide [MESH:C509366] | (0|0) |
(0|0|0) |
| - 1: | alpha-galacto-omega-polyamine [MESH:C478640] | (0|0) |
(0|0|0) |
| - 1: | arginine polyamine [MESH:C076245] | (0|0) |
(0|0|0) |
| - 1: | arginine-grafted bioreducible poly(disulfide amine)polymer [MESH:C534803] | (0|0) |
(0|0|0) |
| - 1: | argiopine [MESH:C050570] | (0|0) |
(0|0|0) |
| - 1: | argiotoxin 659 [MESH:C054141] | (0|0) |
(0|0|0) |
| - 1: | argiotoxin 673 [MESH:C054143] | (0|0) |
(0|0|0) |
| - 1: | argiotoxin-636 [MESH:C558368] | (0|0) |
(0|0|0) |
| - 1: | beta-cyclodextrin-poly(amidoamine) copolymer [MESH:C527738] | (0|0) |
(0|0|0) |
| - 1: | beta-philanthotoxin [MESH:C048056] | (0|0) |
(0|0|0) |
| - 1: | bisnaphthalimidopropyl-4,4'-diaminodiphenylmethane [MESH:C000618991] | (0|0) |
(0|0|0) |
| - 1: | bixalomer [MESH:C000589735] | (0|0) |
(0|0|0) |
| - 1: | caldopentamine [MESH:C035585] | (0|0) |
(0|0|0) |
| - 1: | canavalmine [MESH:C035576] | (0|0) |
(0|0|0) |
| - 1: | copoly(allylamine-N1,N3-diallylpropane-1,3-diamine)acetate [MESH:C588177] | (0|0) |
(0|0|0) |
| - 1: | delta-philanthotoxin [MESH:C034092] | (0|0) |
(0|0|0) |
| - 1: | dephenol-PTX-4.3.3 [MESH:C069952] | (0|0) |
(0|0|0) |
| - 1: | di-(polyethylene glycol)-avidin-biotin-octa(ethyleneimine) [MESH:C522257] | (0|0) |
(0|0|0) |
| - 1: | dideaza-philanthotoxin-12 [MESH:C091262] | (0|0) |
(0|0|0) |
| - 1: | diethylenetriamine [MESH:C005391] | (0|0) |
(0|0|0) |
| - 1: | diiodo-philanthotoxin-343-arginine [MESH:C070462] | (0|0) |
(0|0|0) |
| - 1: | diiodo-philanthotoxin-343-lysine [MESH:C070463] | (0|0) |
(0|0|0) |
| - 1: | dioctyldiethylenetriamine [MESH:C551652] | (0|0) |
(0|0|0) |
| - 1: | dipitramine [MESH:C089721] | (0|0) |
(0|0|0) |
| - 1: | disulfide poly(amido ethylenediamine) [MESH:C520331] | (0|0) |
(0|0|0) |
| - 1: | dopsisamine [MESH:C048266] | (0|0) |
(0|0|0) |
| - 1: | fabclavine Ia [MESH:C000592735] | (0|0) |
(0|0|0) |
| - 1: | genejammer [MESH:C522645] | (0|0) |
(0|0|0) |
| - 1: | homocaldopentamine [MESH:C038817] | (0|0) |
(0|0|0) |
| - 1: | methyl-PTX-4.3.3 [MESH:C069948] | (0|0) |
(0|0|0) |
| - 1: | octaamine 1 [MESH:C513577] | (0|0) |
(0|0|0) |
| - 1: | pavetamine [MESH:C462301] | (0|0) |
(0|0|0) |
| - 1: | pentaaminopentane [MESH:C408582] | (0|0) |
(0|0|0) |
| - 1: | pentaethylenehexamine [MESH:C031122] | (0|0) |
(0|0|0) |
| - 1: | peramine [MESH:C499007] | (0|0) |
(0|0|0) |
| - 1: | phTX 12 [MESH:C405122] | (0|0) |
(0|0|0) |
| - 1: | philanthotoxin 343 [MESH:C074003] | (0|0) |
(0|0|0) |
| - 1: | philanthotoxin-56 [MESH:C505667] | (0|0) |
(0|0|0) |
| - 1: | philanthotoxin-7,4 [MESH:C520929] | (0|0) |
(0|0|0) |
| - 1: | poly(1,12-(3,10-dimethyl-3,10-diaza)dodecane diyl disulfide) [MESH:C072510] | (0|0) |
(0|0|0) |
| - 1: | poly(1,8-(3,6-dimethyl-3,6-diaza)octane diyl disulfide) [MESH:C072512] | (0|0) |
(0|0|0) |
| - 1: | poly(2,2'-bis(3,4-dicarboxyphenyl)hexafluoropropane dianhydride-co-2,2'-bis(4-aminophenyl)hexafluoro [MESH:C454118] | (0|0) |
(0|0|0) |
| - 1: | poly(2-ethyl-2-oxazoline) [MESH:C511916] | (0|0) |
(0|0|0) |
| - 1: | poly(2-ethyl-2-oxazoline)-cholesterol hemisuccinate [MESH:C000603662] | (0|0) |
(0|0|0) |
| - 1: | poly(2-hydroxyethyl methacrylate)-polyamine graft copolymer [MESH:C056971] | (0|0) |
(0|0|0) |
| - 1: | poly(2-hydroxyethylene(dimethyliminio)methylene chloride) [MESH:C446507] | (0|0) |
(0|0|0) |
| - 1: | poly(2-methoxyaniline) [MESH:C543133] | (0|0) |
(0|0|0) |
| - 1: | poly(2-methyl-2-oxazoline) [MESH:C117403] | (0|0) |
(0|0|0) |
| - 1: | poly(2-methyl-2-oxazoline)-grad-poly(2-phenyl-2-oxazoline) [MESH:C000593381] | (0|0) |
(0|0|0) |
| - 1: | poly(2-methyloxazoline) [MESH:C000625732] | (0|0) |
(0|0|0) |
| - 1: | poly(caprolactone-block-ethyleneimine) [MESH:C516446] | (0|0) |
(0|0|0) |
| - 1: | poly(caprolactone-co-6-methyl-2,5-morpholinedione) [MESH:C118770] | (0|0) |
(0|0|0) |
| - 1: | poly(ethyleneimine-co-lactamide-co-succinamide) [MESH:C476044] | (0|0) |
(0|0|0) |
| - 1: | poly(ethylenimine sulfide) [MESH:C517412] | (0|0) |
(0|0|0) |
| - 1: | poly(gamma-methylglutamate)-grafted polyallylamine [MESH:C468911] | (0|0) |
(0|0|0) |
| - 1: | poly(hexamethylene-co-guanidine) [MESH:C402176] | (0|0) |
(0|0|0) |
| - 1: | poly(lactide-co-6-methyl-2,5-morpholinedione) [MESH:C118769] | (0|0) |
(0|0|0) |
| - 1: | poly(methylene tetramine) [MESH:C403809] | (0|0) |
(0|0|0) |
| - 1: | poly(methylene-co-guanidine) [MESH:C402175] | (0|0) |
(0|0|0) |
| - 1: | poly(oxyethylene(dimethyliminio)trimethylene(dimethyliminio)ethylene dichloride) [MESH:C446506] | (0|0) |
(0|0|0) |
| - 1: | polyallylamine [MESH:C063994] | (0|0) |
(0|0|0) |
| - 1: | polyallylamine-benzophenone-maleimidocarboxylate [MESH:C514706] | (0|0) |
(0|0|0) |
| - 1: | polyallylamine-benzophenone-pyridyldithiocarboxylate polymer [MESH:C514705] | (0|0) |
(0|0|0) |
| - 1: | polyamidoamin-alkali blue [MESH:C000615933] | (0|0) |
(0|0|0) |
| - 1: | polyamidoamine-poly N,N'-di-(2-aminoethyl)aminoethyl glutamine graft copolymer [MESH:C582967] | (0|0) |
(0|0|0) |
| - 1: | polyamine-peptide conjugate [MESH:C021243] | (0|0) |
(0|0|0) |
| - 1: | polycations [MESH:C009792] | (0|0) |
(0|0|0) |
| - 1: | polyethylene glycol-poly(propylene imine) [MESH:C522250] | (0|0) |
(0|0|0) |
| - 1: | polyethylene polyamine [MESH:C016071] | (0|0) |
(0|0|0) |
| - 1: | polymethylene tetraamine [MESH:C474278] | (0|0) |
(0|0|0) |
| - 1: | polypropyleneimine octaamine [MESH:C513252] | (0|0) |
(0|0|0) |
| - 1: | propoctamine [MESH:C003224] | (0|0) |
(0|0|0) |
| - 1: | protoaculeine B [MESH:C000591991] | (0|0) |
(0|0|0) |
| - 1: | rhodium 4-(4-aminobenzyl)diethylenetriamine [MESH:C065270] | (0|0) |
(0|0|0) |
| - 1: | sFTX 3.3 [MESH:C102392] | (0|0) |
(0|0|0) |
| - 1: | sar chelate [MESH:C059142] | (0|0) |
(0|0|0) |
| - 1: | technetium Tc 99m 1,4,8,11-tetraazaundecane [MESH:C045774] | (0|0) |
(0|0|0) |
| - 1: | tridentate N,N,N',N'',N''-pentamethyldiethylenetriamine [MESH:C519069] | (0|0) |
(0|0|0) |
| - 1: | trifluoromethyl-PTX-4.3.3 [MESH:C069950] | (0|0) |
(0|0|0) |
| - 1: | zeamine [MESH:C547236] | (0|0) |
(0|0|0) |
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Nitric oxide (NO) synthase oxygenase domain | 0 | DIRECT |
| CAPPD, an extracellular domain of amyloid beta A4 protein | 0 | DIRECT |
| A heparin-binding domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| p53 tetramerization domain | 0 | DIRECT |
| Amyloid beta a4 protein copper binding domain (domain 2) | 0 | DIRECT |
| DBL homology domain (DH-domain) | 0.00002365 | DIRECT |
| EF-hand | 0.00004873 | DIRECT |
| Fibronectin type III | 0.0000692 | DIRECT |
| Metallothionein | 0.0002164 | DIRECT |
| Metalloproteases ("zincins"), catalytic domain | 0.0004358 | DIRECT |
| C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0006004 | DIRECT |
| TSP-1 type 1 repeat | 0.0007475 | DIRECT |
| NAD(P)-linked oxidoreductase | 0.0008307 | DIRECT |
| PDZ domain-like | 0.002203 | INHERITED FROM: Diamines |
| DEATH domain | 0.002701 | INHERITED FROM: Phenylenediamines || N(1),N(11)-diethylnorspermine || Diamines |
| Interleukin 8-like chemokines | 0.003391 | INHERITED FROM: Gadolinium DTPA || N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine || Phenylenediamines || Pentetic Acid |
| Cation efflux protein transmembrane domain-like | 0.004176 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| Nucleotide cyclase | 0.004203 | INHERITED FROM: Ethylenediamines || Methapyrilene |
| Integrin alpha N-terminal domain | 0.004733 | INHERITED FROM: Ethylenediamines || Diamines |
| HMA, heavy metal-associated domain | 0.00546 | INHERITED FROM: Ethylenediamines || Diamines |
| Heme-dependent peroxidases | 0.006963 | INHERITED FROM: Phenylenediamines |
| Leucine zipper domain | 0.007717 | INHERITED FROM: Phenylenediamines || Egtazic Acid || Diamines |
| GTPase activation domain, GAP | 0.008796 | INHERITED FROM: Ethylenediamines || Diamines |
| Ras GEF | 0.009474 | INHERITED FROM: Methapyrilene |
| Calcium ATPase, transduction domain A | 0.01172 | INHERITED FROM: Methapyrilene |
| Protein kinase-like (PK-like) | 0.01465 | INHERITED FROM: GSK2110183 || GSK2141795 |
| Cysteine-rich domain | 0.01769 | INHERITED FROM: Ethylenediamines |
| Voltage-gated potassium channels | 0.01986 | INHERITED FROM: ezogabine |
| Ferritin-like | 0.02058 | INHERITED FROM: Phenylenediamines |
| PH domain-like | 0.02165 | INHERITED FROM: GSK2110183 || Methapyrilene || Diamines |
| Caspase-like | 0.02329 | INHERITED FROM: Phenylenediamines || Egtazic Acid |
| p53-like transcription factors | 0.03572 | INHERITED FROM: Spermine || N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine || Spermidine || Putrescine || N(1),N(11)-diethylnorspermine || Edetic Acid |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.0473 | INHERITED FROM: Phenylenediamines || Bandrowski's base |
| A DNA-binding domain in eukaryotic transcription factors | 0.05004 | INHERITED FROM: Phenylenediamines |
| Bcl-2 inhibitors of programmed cell death | 0.05004 | INHERITED FROM: Egtazic Acid |
| PGBD-like | 0.09542 | INHERITED FROM: Egtazic Acid |
| Hemopexin-like domain | 0.1967 | INHERITED FROM: Egtazic Acid |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.3519 | INHERITED FROM: Egtazic Acid |
| Ribosomal protein S5 domain 2-like | 0.4483 | INHERITED FROM: Egtazic Acid |
| 4-helical cytokines | 0.4887 | INHERITED FROM: Gadolinium DTPA || Egtazic Acid || Pentetic Acid |
| FAD/NAD(P)-binding domain | 0.6581 | INHERITED FROM: Bandrowski's base |
| Cytochrome P450 | 0.8069 | INHERITED FROM: Ethambutol |
| Histone-fold | 0.8563 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| Family A G protein-coupled receptor-like | 1 | INHERITED FROM: methoctramine |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| p53 tetramerization domain | 0 | DIRECT |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| Amyloid beta a4 protein copper binding domain (domain 2) | 0 | DIRECT |
| p53 DNA-binding domain-like | 0 | DIRECT |
| Nitric oxide (NO) synthase oxygenase domain | 0 | DIRECT |
| Hsp90 middle domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| A heparin-binding domain | 0 | DIRECT |
| CAPPD, an extracellular domain of amyloid beta A4 protein | 0 | DIRECT |
| DBL homology domain (DH-domain) | 0.00002593 | DIRECT |
| Fibronectin type III | 0.00008842 | DIRECT |
| EGF-type module | 0.000164 | DIRECT |
| Metallothionein | 0.000188 | DIRECT |
| TSP-1 type 1 repeat | 0.000772 | DIRECT |
| Aldo-keto reductases (NADP) | 0.0007723 | DIRECT |
| Pyrin domain, PYD | 0.002271 | INHERITED FROM: Phenylenediamines || 4-phenylenediamine |
| ABC transporter transmembrane region | 0.002456 | INHERITED FROM: Ethylenediamines || Diamines |
| Integrin alpha N-terminal domain | 0.003103 | INHERITED FROM: Ethylenediamines || Diamines |
| Interleukin 8-like chemokines | 0.003317 | INHERITED FROM: Gadolinium DTPA || Phenylenediamines || Pentetic Acid |
| Adenylyl and guanylyl cyclase catalytic domain | 0.003872 | INHERITED FROM: Ethylenediamines || Methapyrilene |
| S100 proteins | 0.004115 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| HMA, heavy metal-associated domain | 0.004788 | INHERITED FROM: Ethylenediamines || Diamines |
| Caspase catalytic domain | 0.005606 | INHERITED FROM: Phenylenediamines || Egtazic Acid |
| Ras GEF | 0.005702 | INHERITED FROM: Ethylenediamines || Methapyrilene |
| PDEase | 0.005756 | INHERITED FROM: Ethylenediamines |
| Myeloperoxidase-like | 0.00628 | INHERITED FROM: Phenylenediamines |
| Pleckstrin-homology domain (PH domain) | 0.006647 | INHERITED FROM: GSK2110183 || GSK2141795 || Diamines |
| Leucine zipper domain | 0.007698 | INHERITED FROM: Phenylenediamines || Egtazic Acid || Diamines |
| Protein kinases, catalytic subunit | 0.008241 | INHERITED FROM: GSK2110183 || GSK2141795 || Diamines |
| PDZ domain | 0.01106 | INHERITED FROM: Diamines |
| Calcium ATPase, transduction domain A | 0.01135 | INHERITED FROM: Methapyrilene |
| 28-residue LRR | 0.012 | INHERITED FROM: 4-phenylenediamine |
| Cation efflux protein transmembrane domain-like | 0.01231 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| MBT repeat | 0.0145 | INHERITED FROM: Methapyrilene |
| Formin homology 2 domain (FH2 domain) | 0.01675 | INHERITED FROM: Ethylenediamines || Methapyrilene |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.04357 | INHERITED FROM: Phenylenediamines || Bandrowski's base |
| Bcl-2 inhibitors of programmed cell death | 0.04696 | INHERITED FROM: Egtazic Acid |
| A DNA-binding domain in eukaryotic transcription factors | 0.04696 | INHERITED FROM: Phenylenediamines |
| MMP N-terminal domain | 0.09121 | INHERITED FROM: Egtazic Acid |
| Caspase recruitment domain, CARD | 0.106 | INHERITED FROM: Egtazic Acid |
| Hemopexin-like domain | 0.1894 | INHERITED FROM: Egtazic Acid |
| Matrix metalloproteases, catalytic domain | 0.1894 | INHERITED FROM: Egtazic Acid |
| Voltage-gated potassium channels | 0.2166 | INHERITED FROM: ezogabine |
| Short-chain cytokines | 0.2354 | INHERITED FROM: Egtazic Acid |
| FAD/NAD-linked reductases, N-terminal and central domains | 0.2354 | INHERITED FROM: Phenylenediamines || Bandrowski's base |
| Nucleosome core histones | 0.5262 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| Cytochrome P450 | 0.8786 | INHERITED FROM: Ethambutol |
| Rhodopsin-like | 1 | INHERITED FROM: methoctramine |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| p53 tetramerization domain | 0 | Direct |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| Amyloid beta a4 protein copper binding domain (domain 2) | 0 | Direct |
| p53 DNA-binding domain-like | 0 | Direct |
| Nitric oxide (NO) synthase oxygenase domain | 0 | Direct |
| Hsp90 middle domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| A heparin-binding domain | 0 | Direct |
| CAPPD, an extracellular domain of amyloid beta A4 protein | 0 | Direct |
| DBL homology domain (DH-domain) | 0.00002593 | Direct |
| Fibronectin type III | 0.00008842 | Direct |
| EGF-type module | 0.000164 | Direct |
| Metallothionein | 0.000188 | Direct |
| TSP-1 type 1 repeat | 0.000772 | Direct |
| Aldo-keto reductases (NADP) | 0.0007723 | Direct |
| Pyrin domain, PYD | 0.002271 | Inherited |
| ABC transporter transmembrane region | 0.002456 | Inherited |
| Integrin alpha N-terminal domain | 0.003103 | Inherited |
| Interleukin 8-like chemokines | 0.003317 | Inherited |
| Adenylyl and guanylyl cyclase catalytic domain | 0.003872 | Inherited |
| S100 proteins | 0.004115 | Inherited |
| HMA, heavy metal-associated domain | 0.004788 | Inherited |
| Caspase catalytic domain | 0.005606 | Inherited |
| Ras GEF | 0.005702 | Inherited |
| PDEase | 0.005756 | Inherited |
| Myeloperoxidase-like | 0.00628 | Inherited |
| Pleckstrin-homology domain (PH domain) | 0.006647 | Inherited |
| Leucine zipper domain | 0.007698 | Inherited |
| Protein kinases, catalytic subunit | 0.008241 | Inherited |
| PDZ domain | 0.01106 | Inherited |
| Calcium ATPase, transduction domain A | 0.01135 | Inherited |
| 28-residue LRR | 0.012 | Inherited |
| Cation efflux protein transmembrane domain-like | 0.01231 | Inherited |
| MBT repeat | 0.0145 | Inherited |
| Formin homology 2 domain (FH2 domain) | 0.01675 | Inherited |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.04357 | Inherited |
| Bcl-2 inhibitors of programmed cell death | 0.04696 | Inherited |
| A DNA-binding domain in eukaryotic transcription factors | 0.04696 | Inherited |
| MMP N-terminal domain | 0.09121 | Inherited |
| Caspase recruitment domain, CARD | 0.106 | Inherited |
| Hemopexin-like domain | 0.1894 | Inherited |
| Matrix metalloproteases, catalytic domain | 0.1894 | Inherited |
| Voltage-gated potassium channels | 0.2166 | Inherited |
| Short-chain cytokines | 0.2354 | Inherited |
| FAD/NAD-linked reductases, N-terminal and central domains | 0.2354 | Inherited |
| Nucleosome core histones | 0.5262 | Inherited |
| Cytochrome P450 | 0.8786 | Inherited |
| Rhodopsin-like | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Nitric oxide (NO) synthase oxygenase domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| A heparin-binding domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Amyloid beta a4 protein copper binding domain (domain 2) | 0 | DIRECT |
| CAPPD, an extracellular domain of amyloid beta A4 protein | 0 | DIRECT |
| p53 tetramerization domain | 0 | DIRECT |
| DBL homology domain (DH-domain) | 0.00001198 | DIRECT |
| EF-hand | 0.00002534 | DIRECT |
| Fibronectin type III | 0.00003653 | DIRECT |
| Metallothionein | 0.0001199 | DIRECT |
| Metalloproteases ("zincins"), catalytic domain | 0.0002494 | DIRECT |
| C2 domain (Calcium/lipid-binding domain, CaLB) | 0.0003495 | DIRECT |
| TSP-1 type 1 repeat | 0.00044 | DIRECT |
| NAD(P)-linked oxidoreductase | 0.0004912 | DIRECT |
| PDZ domain-like | 0.001369 | INHERITED FROM: Diamines |
| DEATH domain | 0.001696 | INHERITED FROM: Diamines || Phenylenediamines || N(1),N(11)-diethylnorspermine |
| Interleukin 8-like chemokines | 0.002153 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine || Gadolinium DTPA || Phenylenediamines || Pentetic Acid |
| Cation efflux protein transmembrane domain-like | 0.002684 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| Nucleotide cyclase | 0.002702 | INHERITED FROM: Diamines || Methapyrilene || Ethylenediamines |
| Integrin alpha N-terminal domain | 0.003058 | INHERITED FROM: Diamines || Ethylenediamines |
| HMA, heavy metal-associated domain | 0.003553 | INHERITED FROM: Diamines || Ethylenediamines |
| Heme-dependent peroxidases | 0.004597 | INHERITED FROM: Phenylenediamines |
| Leucine zipper domain | 0.005128 | INHERITED FROM: Diamines || Phenylenediamines || Egtazic Acid |
| GTPase activation domain, GAP | 0.005888 | INHERITED FROM: Diamines || Ethylenediamines |
| Ras GEF | 0.006363 | INHERITED FROM: Methapyrilene |
| Calcium ATPase, transduction domain A | 0.007971 | INHERITED FROM: Methapyrilene |
| Protein kinase-like (PK-like) | 0.0101 | INHERITED FROM: GSK2110183 || GSK2141795 |
| Calcium ATPase, transmembrane domain M | 0.01148 | INHERITED FROM: Methapyrilene |
| Cysteine-rich domain | 0.01234 | INHERITED FROM: Ethylenediamines |
| Voltage-gated potassium channels | 0.01395 | INHERITED FROM: ezogabine |
| Ferritin-like | 0.01448 | INHERITED FROM: Phenylenediamines |
| PH domain-like | 0.01527 | INHERITED FROM: Diamines || Methapyrilene || GSK2110183 || GSK2141795 |
| Caspase-like | 0.01649 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine || Phenylenediamines || Egtazic Acid |
| p53-like transcription factors | 0.02594 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine || Putrescine || Spermidine || Spermine || Edetic Acid || N(1),N(11)-diethylnorspermine |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.03491 | INHERITED FROM: Phenylenediamines || Bandrowski's base |
| A DNA-binding domain in eukaryotic transcription factors | 0.03708 | INHERITED FROM: Phenylenediamines |
| Bcl-2 inhibitors of programmed cell death | 0.03708 | INHERITED FROM: Egtazic Acid |
| PGBD-like | 0.07316 | INHERITED FROM: Egtazic Acid |
| Hemopexin-like domain | 0.1578 | INHERITED FROM: Egtazic Acid |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.2954 | INHERITED FROM: Egtazic Acid |
| Ribosomal protein S5 domain 2-like | 0.3839 | INHERITED FROM: Egtazic Acid |
| 4-helical cytokines | 0.4222 | INHERITED FROM: Gadolinium DTPA || Pentetic Acid || Egtazic Acid |
| FAD/NAD(P)-binding domain | 0.5865 | INHERITED FROM: Bandrowski's base |
| Cytochrome P450 | 0.7381 | INHERITED FROM: Ethambutol |
| Histone-fold | 0.7901 | INHERITED FROM: N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine |
| Family A G protein-coupled receptor-like | 1 | INHERITED FROM: methoctramine |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57424,49899
57424 - LDL receptor-like module
49899 - Concanavalin A-like lectins/glucanases | 0 | DIRECT |
49417,47719
49417 - p53-like transcription factors
47719 - p53 tetramerization domain | 0 | DIRECT |
56491,89811
56491 - A heparin-binding domain
89811 - Amyloid beta a4 protein copper binding domain (domain 2) | 0 | DIRECT |
49899,57424
49899 - Concanavalin A-like lectins/glucanases
57424 - LDL receptor-like module | 0 | DIRECT |
48065,50729
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like | 0.000007425 | DIRECT |
82895,82895
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat | 0.0000165 | DIRECT |
47986,52540
47986 - DEATH domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.0008727 | DIRECT |
50044,48065
50044 - SH3-domain
48065 - DBL homology domain (DH-domain) | 0.000957 | DIRECT |
47986,52129
47986 - DEATH domain
52129 - Caspase-like | 0.00143 | INHERITED FROM: Diamines || Ethylenediamines || Egtazic Acid |
63748,63748
63748 - Tudor/PWWP/MBT
63748 - Tudor/PWWP/MBT | 0.002702 | INHERITED FROM: Diamines || Methapyrilene |
48726,49265
48726 - Immunoglobulin
49265 - Fibronectin type III | 0.002832 | INHERITED FROM: Diamines || Methapyrilene || Ethylenediamines |
57184,57184
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain | 0.005281 | INHERITED FROM: Ethylenediamines |
69318,69179
69318 - Integrin alpha N-terminal domain
69179 - Integrin domains | 0.005295 | INHERITED FROM: Diamines || Ethylenediamines |
69179,69179
69179 - Integrin domains
69179 - Integrin domains | 0.005295 | INHERITED FROM: Diamines || Ethylenediamines |
49265,49265
49265 - Fibronectin type III
49265 - Fibronectin type III | 0.008644 | INHERITED FROM: Diamines || Ethylenediamines |
57196,57196
57196 - EGF/Laminin
57196 - EGF/Laminin | 0.0121 | INHERITED FROM: Ethylenediamines |
50729,56112
50729 - PH domain-like
56112 - Protein kinase-like (PK-like) | 0.01313 | INHERITED FROM: GSK2110183 || GSK2141795 |
47454,57959
47454 - A DNA-binding domain in eukaryotic transcription factors
57959 - Leucine zipper domain | 0.02196 | INHERITED FROM: Phenylenediamines |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.03491 | INHERITED FROM: Phenylenediamines || Bandrowski's base |
57184,57196
57184 - Growth factor receptor domain
57196 - EGF/Laminin | 0.03681 | INHERITED FROM: Methapyrilene |
47090,55486
47090 - PGBD-like
55486 - Metalloproteases ("zincins"), catalytic domain | 0.07316 | INHERITED FROM: Egtazic Acid |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57424,49899
57424 - LDL receptor-like module
49899 - Concanavalin A-like lectins/glucanases | 0 | Direct |
49417,47719
49417 - p53-like transcription factors
47719 - p53 tetramerization domain | 0 | Direct |
56491,89811
56491 - A heparin-binding domain
89811 - Amyloid beta a4 protein copper binding domain (domain 2) | 0 | Direct |
49899,57424
49899 - Concanavalin A-like lectins/glucanases
57424 - LDL receptor-like module | 0 | Direct |
48065,50729
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like | 0.000007425 | Direct |
82895,82895
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat | 0.0000165 | Direct |
47986,52540
47986 - DEATH domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.0008727 | Direct |
50044,48065
50044 - SH3-domain
48065 - DBL homology domain (DH-domain) | 0.000957 | Direct |
47986,52129
47986 - DEATH domain
52129 - Caspase-like | 0.00143 | Inherited |
63748,63748
63748 - Tudor/PWWP/MBT
63748 - Tudor/PWWP/MBT | 0.002702 | Inherited |
48726,49265
48726 - Immunoglobulin
49265 - Fibronectin type III | 0.002832 | Inherited |
57184,57184
57184 - Growth factor receptor domain
57184 - Growth factor receptor domain | 0.005281 | Inherited |
69318,69179
69318 - Integrin alpha N-terminal domain
69179 - Integrin domains | 0.005295 | Inherited |
69179,69179
69179 - Integrin domains
69179 - Integrin domains | 0.005295 | Inherited |
49265,49265
49265 - Fibronectin type III
49265 - Fibronectin type III | 0.008644 | Inherited |
57196,57196
57196 - EGF/Laminin
57196 - EGF/Laminin | 0.0121 | Inherited |
50729,56112
50729 - PH domain-like
56112 - Protein kinase-like (PK-like) | 0.01313 | Inherited |
47454,57959
47454 - A DNA-binding domain in eukaryotic transcription factors
57959 - Leucine zipper domain | 0.02196 | Inherited |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0.03491 | Inherited |
57184,57196
57184 - Growth factor receptor domain
57196 - EGF/Laminin | 0.03681 | Inherited |
47090,55486
47090 - PGBD-like
55486 - Metalloproteases ("zincins"), catalytic domain | 0.07316 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49899,57424,49899
49899 - Concanavalin A-like lectins/glucanases
57424 - LDL receptor-like module
49899 - Concanavalin A-like lectins/glucanases | 0 | DIRECT |
82895,82895,82895
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat | 0.000001016 | DIRECT |
57196,57196,57184
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain | 0.0004285 | DIRECT |
50044,48065,50729
50044 - SH3-domain
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like | 0.000957 | DIRECT |
48726,48726,49265
48726 - Immunoglobulin
48726 - Immunoglobulin
49265 - Fibronectin type III | 0.002569 | INHERITED FROM: Diamines || Methapyrilene || Ethylenediamines |
69318,69179,69179
69318 - Integrin alpha N-terminal domain
69179 - Integrin domains
69179 - Integrin domains | 0.005295 | INHERITED FROM: Diamines || Ethylenediamines |
69179,69179,69179
69179 - Integrin domains
69179 - Integrin domains
69179 - Integrin domains | 0.006872 | INHERITED FROM: Ethylenediamines |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49899,57424,49899
49899 - Concanavalin A-like lectins/glucanases
57424 - LDL receptor-like module
49899 - Concanavalin A-like lectins/glucanases | 0 | Direct |
82895,82895,82895
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat
82895 - TSP-1 type 1 repeat | 0.000001016 | Direct |
57196,57196,57184
57196 - EGF/Laminin
57196 - EGF/Laminin
57184 - Growth factor receptor domain | 0.0004285 | Direct |
50044,48065,50729
50044 - SH3-domain
48065 - DBL homology domain (DH-domain)
50729 - PH domain-like | 0.000957 | Direct |
48726,48726,49265
48726 - Immunoglobulin
48726 - Immunoglobulin
49265 - Fibronectin type III | 0.002569 | Inherited |
69318,69179,69179
69318 - Integrin alpha N-terminal domain
69179 - Integrin domains
69179 - Integrin domains | 0.005295 | Inherited |
69179,69179,69179
69179 - Integrin domains
69179 - Integrin domains
69179 - Integrin domains | 0.006872 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this CC term
 |
Plot tree as:
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Download Newick format tree:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this CC term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > Polyamines
