SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000000087 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000000087
Domain Number 1 Region: 66-370
Classification Level Classification E-value
Superfamily ARM repeat 1.34e-31
Family Plakophilin 1 helical region 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000000087   Gene: ENSFALG00000000082   Transcript: ENSFALT00000000087
Sequence length 418
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603590.1:31299:41203:1 gene:ENSFALG00000000082 transcript:ENSFALT00000000087 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDPEEAVREAVQQFESQGVDLSNIVKAVPPPASENGQRQKHQILLSLESLCRAVAERDVA
ELPRQLSALAAQCREQPASRYLAGRNGAYPALLSACRLAAGDRDSLLLAFSTLAALLDGQ
PDLLDAAGQQLLLQSLRERREDAEMTLAGIRCVRHACLKHEQNRQDFVKGGILPLLTGAI
TQHGHSAEVVRAAASALRIMTFDDDIRVPFGHAHDHAKMIVLENDGLRVLIEAAKAFRDN
SGVLSELCATLSRLSVRNEFCQEIVDLGGLNFMVTLLADCMEHPDVVKQVLSAIRAVAGN
DDVKDAIVGAGATELIVLAISRHLGNPQICEQGCAALCVLALRKPENCSVIMEGGGALAA
LQAMKAHPREVAVQVCPCHTPERWLCRCVCPCHTPEVAVQVCPCHTPERWLCRSRPAC
Download sequence
Identical sequences U3JBD3
ENSFALP00000000087

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]