SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000000260 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000000260
Domain Number 1 Region: 133-376
Classification Level Classification E-value
Superfamily VPS9 domain 3.14e-57
Family VPS9 domain 0.00067
Further Details:      
 
Domain Number 2 Region: 672-887
Classification Level Classification E-value
Superfamily Ankyrin repeat 9.33e-47
Family Ankyrin repeat 0.00015
Further Details:      
 
Domain Number 3 Region: 401-612
Classification Level Classification E-value
Superfamily Ankyrin repeat 3.61e-45
Family Ankyrin repeat 0.00027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000000260   Gene: ENSFALG00000000253   Transcript: ENSFALT00000000263
Sequence length 1062
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603218.1:4937396:4994883:-1 gene:ENSFALG00000000253 transcript:ENSFALT00000000263 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAMYDEDILKNPFYLAIQKRRPDLCSKVAELHGIVLVPCKGSLSSNSLSTCQFESYVLKP
LEEKFQTLNGKEIFIQGNLIILGAGFNYTLSVPVLFEETFYNEKEESFSILCIAHPLEKT
ESSSESTASSNSYSLKNIEDVREFLGRHCERFDKYLGSFYRTFKEHERKSLRHYIDSVNA
LYTKCLQHLLRDSHLKMLAKQEEQMNLIKQAVEMYIHHAIYDLVFKYVGTIEASEDADFN
KITRSLQDLQQKDIGVKPEFSFNIPRAKRELGQLNKCTSPQQKLLCLRKVVQIIMQSPSQ
RVNMETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRLCSSVKDELGYCLTSIEAAIE
YIRQGNLSDRSTESESLCDKLLLRQRMNLLSQMSAAPIDCLFKHIASGDQEEVERLLSQG
DSDKDTVQKMCHPLCYCDKCEKLVSGKLNDPSIITPFSRDDRGYTPLHIAAICGQTSLVD
LLVAKGAIVNATDYHGSTPLHLACQKGYQNVTLLLLHYKASSDVQDNNGNTALHLACTYG
HEDCVKALVYYDVHSCRLDIGNEKGDTALHIAARWGYQGIIEVLLQNGANPEIQNRMKET
SLQCALNSKILSLMELNYLTFERGQSASESPLRSPQRSAETFSRGSSVSSLSSASTDIRQ
EEVKNSYKEVEKLLRAVADGDLEMVRYLLEWVEEDLEDEDDTASISKPEFCHPLCQCSKC
GPAQKKFSRICANGLGVNVSNQDGFTPLHMAALHGHGELAALLLRHGANASAKNAQLAAP
LHLACQRGHSQVVKCLMDYNAKQNKKDIYGNTPLIYACLNGHYETTALLLQHGASVNLCN
AKGNTALHEAVASRHEALVALLLQNGALRHLRNERSCTAADCAEPNSNIMKLLEAAPSCV
PTSAEGEKKSEQHVTVKIRKKVHPKPCEEADDPISRQLQLVQSINRFNKEKHLRRTITRD
KSVPNFDYHLLHQMAIKSFDKSKLKSVGMLEQSTVQVTDTRCSGEFAEDDDTTAPPRSKL
LQRRHTVNVALPAEEGSDSGSCSPAEPGAPRPQDCHGSVSDH
Download sequence
Identical sequences U3JBV6
XP_005052748.1.66865 XP_005052749.1.66865 XP_005052750.1.66865 ENSFALP00000000260

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]