SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000001007 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000001007
Domain Number 1 Region: 46-131
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.45e-23
Family La domain 0.00074
Further Details:      
 
Domain Number 2 Region: 132-202
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.36e-21
Family Canonical RBD 0.0034
Further Details:      
 
Domain Number 3 Region: 465-571
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000000201
Family Canonical RBD 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000001007   Gene: ENSFALG00000000972   Transcript: ENSFALT00000001012
Sequence length 602
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603361.1:140362:162122:1 gene:ENSFALG00000000972 transcript:ENSFALT00000001012 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQIAGFITWIFIMTGMETETARDKAMEEESTEQKKEREKKKRSRVKQVLADIAKQVDFWF
GDVNLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVELDLEG
TRIRRRQPLGERPKDVDSRTVYVELLPKNVNHSWIERVFGKCGNVVYVSIPRYRSTGDPK
GFAFVEFETKEQAEKAIEFLNNPPEEAPRKPGIFPKTVKNKPVPTLNSSDNTVVEEKKKK
KKKKSKIKKESNAQAAAEPKESNTNNTTEPVPKSKRHRTPSECSEMEGTEPPKQPSKREK
RKWDRTESSEVTWESRPGKRKRTTSGNGETSAPKVMKTAEKDEVETVKEEIPEAPKDSNE
VSAEEEKDKKDTSLSKSKRKHKKKHKERHKMGEEVIPLRVLSKTEWMDLKQEYLALQKAS
MASLKKTMSQIKPDPVGEMETESGVQKSENDKTTSEDCAPPAKANTMGPQFVSGVIVKII
STEPLPGRKQIKDALAVLAEVAYVDMLEGDTECHVRFKTPEDAQTVMKSYKEIQIKNNWK
FEVLTGDNEQRYWQKILVDRQAKLNQPREKKRGTEKLIAKAERMRLEKTQQTSKHIRFTD
DN
Download sequence
Identical sequences U3JE03
ENSFALP00000001007 XP_016153253.1.66865

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]