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  Home > Genomes > Ficedula albicollis 76_1.0 > ENSFALP00000004889

Domain assignment for ENSFALP00000004889 from Ficedula albicollis 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSFALP00000004889
Domain Number 1 Region: 1160-1217
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.94e-19
Family Classic zinc finger, C2H2 0.0072
Further Details:      
 
Domain Number 2 Region: 1707-1766
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.19e-18
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 503-560
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.38e-18
Family Classic zinc finger, C2H2 0.016
Further Details:      
 
Domain Number 4 Region: 962-1018
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.74e-18
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 5 Region: 181-231
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.95e-18
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 6 Region: 652-708
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.8e-17
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 7 Region: 465-517
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000143
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 8 Region: 1202-1254
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000139
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 9 Region: 217-278
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000505
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 10 Region: 697-749
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000797
Family Classic zinc finger, C2H2 0.0083
Further Details:      
 
Domain Number 11 Region: 1003-1055
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000017
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 12 Region: 1667-1727
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000109
Family Classic zinc finger, C2H2 0.026
Further Details:      
 
Domain Number 13 Region: 78-127
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000219
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Domain Number 14 Region: 1756-1789
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000803
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 15 Region: 20-72
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000326
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 16 Region: 114-162
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000349
Family Classic zinc finger, C2H2 0.036
Further Details:      
 
Weak hits

Sequence:  ENSFALP00000004889
Domain Number - Region: 1377-1465
Classification Level Classification E-value
Superfamily Clathrin adaptor appendage domain 0.00105
Family gamma-adaptin C-terminal appendage domain-like 0.046
Further Details:      
 
Domain Number - Region: 265-296
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00357
Family Classic zinc finger, C2H2 0.038
Further Details:      
 
Domain Number - Region: 1642-1676
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.055
Family Classic zinc finger, C2H2 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000004889   Gene: ENSFALG00000004682   Transcript: ENSFALT00000004913
Sequence length 1833
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603189.1:8216760:8281862:1 gene:ENSFALG00000004682 transcript:ENSFALT00000004913 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
DDVLTPNTESGNFPYQVPNFHKCEICLLSFPRETQFQRHMRDHEQNDKPHRCDQCPMSFN
VEFNLTLHKCTHNGEDPTCPVCNKKFSRVASLKAHIMLHEKEENLICSECGDEFTLQSQL
SIHMEEHRQELAGSRIHSCKSCKKEFETSSQLKEHMKTHYKIRVSNTRSYNRNIDRSGFT
YSCPHCGKTFQKPSQLTRHVRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACA
FCPAAFSQKGNLQSHIQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSA
SASTDVSHVTAATHFRSPLLQQTENQVSPAAAHQGQQTVTDVIQQLLELSEPGPVENNQP
QQPGQQLNIAVGISRDILQQALENSGLSSIPVSAHSTDCSQAKAAGAQDQNPDVPSLSNH
QGDSNSAEQDKEQESTDKIDKKEKKFIKKKSPFLPGSIREENGIRWHVCPYCSKEFKKPS
DLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQFCMKSFSTSGSLKV
HIRLHTGVRPFACPHCDKKFRTSGHRKTHITSHFKHTELRKLRHQRKPAKVRVGKSSGPV
PDIPLQEPILITDLGLIQPIPRNSQVFQNYFNSNYVNNAERPYKCYYCHRAYKKSCHLKQ
HIRSHTGEKPFKCSQCGRGFVSAGVLKAHIRTHTGLKAFKCVVCNGAFTTGGSLRRHMGI
HNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQNQQSSSIDDSTVHQQSIHVST
QMQVEIQSDELQQSETVATDQQAILELDQQPVVGTEETALEQELADQPLEQDEDRFVTSQ
HALQENITQFEQQTITQPPFDQQSLSQGFTVNDSYNQQTQFPAVQQLQDSSTLESQALST
SYHPPALLQVPNTETINVTTRLIQDQSPQEELELHTQRPHFLEDNEDQSRRSYRCEYCNK
GFKKSSHLKQHVRSHTGEKPYKCQLCGRGFVSSGVLKSHEKTHTGVKAFSCSICNTSFTT
NGSLTRHMATHMSMKPYKCPFCDESFRTTVHCKKHMKKHQAVSSAVAAATDTGGGVACVE
DEDETSERTSRKSRPGVITFTEEETAELAKIRPQESATVSEKVLVQSAAEKDRISEIKDK
QAELEAEPKYANCCSYCPKSFKKPSDLVRHVRIHTGEKPYKCDECGKSFTVKSTLDCHVK
THTGQKLFCCHVCSNSFSTKGSLKVHMRLHTGAKPFKCPHCDLRFRTSGRRKTHIQCHYK
PDAKKVRKPVARTSTEGLQPVSLLNSSSTDPNVFIMNNSVLTSQFDQNLLQQGLVGQAIL
PASVSAGGDLTVSLTDGSLATLEGIQLQLAANLVGQNVQISGIDATGINNITLQIDPSIL
QQTLQQSNLLTQQLTGDPTMTPQNPSLQATENAVPANVVIQPISGLSLQPTVTSSANMTI
GSLSEQESVLTTSANGAQDITQVMTSQGMVSSTNGQHEIMLTINNSSLSQVLAHASGSTT
ATSSGSPQEITLTISELNTTGGTNLPPATPISQSAVSAQNLVMSSSGVGGDGSVTLTLAD
TQGMLSGGLDAVTLNITSQGQQFPAILTDSSLASQSGSGSQQVILVSHTPHSAPASSDEI
TYQVTEVSPNIAKSSQAEKETRGHQCFECSQTFYSVTMLTHHCKEVHGKERIHVCHICNK
AFKRATHLKEHMQTHQGGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFQCT
LCEKAFNQKSALKVHMKRHTGERPYKCDYCAMGFTQKSNMKLHMKRTHGYTGPVQEPANH
QEQEGEDISRALNLEEVVQESSNEWQNIGNVFR
Download sequence
Identical sequences U3JQ35
ENSFALP00000004889

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.