SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000005288 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000005288
Domain Number 1 Region: 297-512,561-971
Classification Level Classification E-value
Superfamily ARM repeat 2.97e-42
Family PBS lyase HEAT-like repeat 0.047
Further Details:      
 
Domain Number 2 Region: 4-158
Classification Level Classification E-value
Superfamily ARM repeat 0.0000000115
Family Clathrin adaptor core protein 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000005288   Gene: ENSFALG00000005086   Transcript: ENSFALT00000005314
Sequence length 1060
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603226.1:1308326:1323274:1 gene:ENSFALG00000005086 transcript:ENSFALT00000005314 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVDEQNLNFLLSYCISALRQCSSWTHVEILQALAALVYNNGPKCQKYLPDLLGKGGLLLQ
FSDPGQPDVELRRAAVRSMANLCLSVPGQPYLDESYRSVCFQTFLGVLQSSKTPDVDDIT
FCMLLQSALKGVQSLLNGGKMKLMQTDQIGVLLAVLKKCMFHGLPGLSIEVPTALYPAPL
PQYDKRSPVKQEQSEPATSKQTGSRRKKCKGKQKKGEFGEEGREDSGDAGNESVLGADML
KLHLGDVQGSPCPDPRPRVWDAGAGKEPLPLPTGCTRISSSESEYSDTEGGIQSKVRSYQ
ANVRQGALACFLSTIKSIEKRVLYGYWSAFVPDAPGIGSPQSVSLMTIALKDPSPKTRAC
ALQVLSAFLEGSKQFLSVAEDANDHKRAFTPFSVTIASSIRELHRCLLLALVAESSSQTL
TQIVKCLANLVSNAPYSRLKPGLLTRVWNQIKPYISHKDVNVRVSSLTLLGAIVSVQAPL
PEVQLLLQQPSSSGLNSSGSTTPRRFSSCEQWRKALPWAGANPLDSPAGCGPAEPCWLLH
LCVSIIVLPREDSCSDSDAAFPSLGSVYEPCPLRLEALQVLALLVKGYFPMAQSYFLELG
EVACRCMEEMDPSIQLHGAKLLEELGTGVLQQHKPDSPTAPEQRVPVSMVVTFWTMMLNG
PLPGTLQNSPHATLQTSACDALSSILPEAFSLLQGDQQILCVTLLLGLNHSENPLVKAAA
ARALGVYILFPCLRQDVMFVADTANAILNSLHDKSPNVRAKAAWSLGNLTDTLIINMETM
GQSFQEELSDLLLLKLLRSATEASKDRDKVKSNAVRALGNVLHFLQPCHVGNPRFREAIE
ESLQALIATVASEATMKVRWNACYALGNVFKNPALPLGEAPWARQAFSALSSVVKSCKNF
KVRIKSAMALSIPSKRECYGSTEQFCQIWSALVVALQRSEDTEDFLEFKYSSSLRTQICQ
ALLHLLQLARSTDLPLIGGSLREHGEHIKPHVLQYLRCSGEESETGAHTDLGERERGVQG
AIEHLSGIERELQGKARVRVSLYLEDVLTDHTNATELTEA
Download sequence
Identical sequences U3JR84
ENSFALP00000005288 XP_016158572.1.66865

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]