SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1a6dA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1a6dA
Domain Number 1 Region: 16-145,402-522
Classification Level Classification E-value
Superfamily GroEL equatorial domain-like 3.88e-93
Family Group II chaperonin (CCT, TRIC), ATPase domain 0.000000038
Further Details:      
 
Domain Number 2 Region: 209-375
Classification Level Classification E-value
Superfamily GroEL apical domain-like 2.42e-60
Family Group II chaperonin (CCT, TRIC), apical domain 0.000000156
Further Details:      
 
Domain Number 3 Region: 146-213,365-401
Classification Level Classification E-value
Superfamily GroEL-intermediate domain like 4.27e-27
Family Group II chaperonin (CCT, TRIC), intermediate domain 0.0000209
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1a6dA   PDB: 1a6d
Sequence length 545
Comment (A:)
Sequence
mmtgqvpilvlkegtqreqgknaqrnnieaakaiadavrttlgpkgmdkmlvdsigdiii
sndgatilkemdvehptakmivevskaqdtavgdgtttavvlsgellkqaetlldqgvhp
tvisngyrlavnearkiideiaekstddatlrkialtalsgkntglsndfladlvvkavn
avaevrdgktivdtanikvdkknggsvndtqfisgividkekvhskmpdvvknakialid
saleikkteieakvqisdpskiqdflnqetntfkqmvekikksganvvlcqkgiddvaqh
ylakegiyavrrvkksdmeklakatgakivtdlddltpsvlgeaetveerkigddrmtfv
mgcknpkavsilirggtdhvvseveralndairvvaitkedgkflwgggaveaelamrla
kyansvggreqlaieafakaleiiprtlaenagidpintliklkaddekgrisvgvdldn
ngvgdmkakgvvdplrvkthalesavevatmilriddviaskkstppsgqggqgqgmpgg
gmpey
Download sequence
Identical sequences 1a6dA 1a6d_A 1a6e_A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]