SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1c8dA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1c8dA
Domain Number 1 Region: 37-558
Classification Level Classification E-value
Superfamily ssDNA viruses 1.21e-250
Family Parvoviridae-like VP 0.00000000000000404
Further Details:      
 
Domain Number 2 Region: 421-577
Classification Level Classification E-value
Superfamily ECOD 2.25e-38
Family ECOD 0.00061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1c8dA   PDB: 1c8d   SUPERFAMILY: 1c8dA
Sequence length 584
Comment (A:)
Sequence
msdgavqpdggqpavrneratgsgngsgggggggsggvgistgtfnnqtefkflengwvy
itanssrlvhlnmpesenyrrvvvnnmdktavngnmalddihaeivtpwslvdanawgvw
fnpgdwqlivntmselhlvsfeqeifnvvlktvsesatqpptkvynndltaslmvaldsn
ntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlipshtgtsgtptniyhgtdpdd
vqfytiensvpvhllrtgdefatgtfffdckpcrlthtwqtnralglppflnslpqsegd
tnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysapyysfeastqgpfktpiaag
rggaqtdenqaadgnpryafgrqhgqkttttgetperftyiahqdtgrypegdwiqninf
nlpvtndnvllptdpiggktginytnifntygpltalnnvppvypngqiwdkefdtdlkp
rlhvnapfvcqnncpgqlfvkvapnltnqydpdasanmsrivtysdfwwkgklvfkaklr
ashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlaprkly
Download sequence
Identical sequences 1c8d_A 1ijs_P 3jcx_A 1c8dA

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