SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1c9bB from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1c9bB
Domain Number 1 Region: 92-176
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 7.69e-55
Family TATA-box binding protein (TBP), C-terminal domain 0.02
Further Details:      
 
Domain Number 2 Region: 7-86
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 4.9e-54
Family TATA-box binding protein (TBP), C-terminal domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1c9bB   PDB: 1c9b
Sequence length 180
Comment (B:)
Sequence
gsgivpqlqnivstvnlgckldlktialrarnaeynpkrfaavimrireprttalifssg
kmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglvlth
qqfssyepelfpgliyrmikprivllifvsgkvvltgakvraeiyeafeniypilkgfrk
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Identical sequences 1c9bB 1c9b_B 1c9b_F 1c9b_J 1c9b_N 1c9b_R

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