SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1iugA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1iugA
Domain Number 1 Region: 3-347
Classification Level Classification E-value
Superfamily PLP-dependent transferases 1.08e-79
Family Cystathionine synthase-like 0.000000000133
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1iugA   PDB: 1iug   SUPERFAMILY: 1iugA
Sequence length 352
Comment (A:)
Sequence
MDWLLTPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSG
TLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKE
GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAA
SGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVA
AVLEEVLPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKE
AFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEILPAS
Download sequence
Identical sequences Q5SKR1
1iug_A 1iug_B gi|55980551|ref|YP_143848.1| 1iugA 300852.TTHA0582 WP_011228041.1.52262 YP_143848.1.19876 ttk003000402.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]