SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1l0aA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1l0aA
Domain Number 1 Region: 38-188
Classification Level Classification E-value
Superfamily TRAF domain-like 1.62e-51
Family MATH domain 0.0001
Further Details:      
 
Domain Number 2 Region: 2-37
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 6.3e-18
Family Trimerization domain of TRAF 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1l0aA   PDB: 1l0a
Sequence length 192
Comment (A:)
Sequence
ntgllesqlsrhdqmlsvhdirladmdlrfqvletasyngvliwkirdykrrkqeavmgk
tlslysqpfytgyfgykmcarvylngdgmgkgthlslffvimrgeydallpwpfkqkvtl
mlmdqgssrrhlgdafkpdpnsssfkkptgemniasgcpvfvaqtvlengtyikddtifi
kvivdtsdlpdp
Download sequence
Identical sequences 1kzz_A 1l0a_A 1zms_A 2gkw_A 1l0aA cath|current|1kzzA00/313-504 cath|current|1l0aA00/313-504 cath|current|1zmsA00/313-504 cath|current|2gkwA00/313-504

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