SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1ldkB from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ldkB
Domain Number 1 Region: 3-276
Classification Level Classification E-value
Superfamily Cullin homology domain 4.39e-106
Family Cullin homology domain 0.0000000000944
Further Details:      
 
Domain Number 2 Region: 277-366
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.08e-30
Family SCF ubiquitin ligase complex WHB domain 0.00000763
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1ldkB   PDB: 1ldk
Sequence length 366
Comment (B:)
Sequence
maqssskspellarycdsllkkssknpeeaeledtlnqvmvvfkyiedkdvfqkfyakml
akrlvhqnsasddaeasmisklkqacgfeytsklqrmfqdigvskdlneqfkkhltnsep
ldldfsiqvlssgswpfqqsctfalpselersyqrftafyasrhsgrkltwlyqlskgel
vtncfknrytlqastfqmaillqyntedaytvqqltdstqikmdilaqvlqillkskllv
ledenanvdevelkpdtliklylgyknkklrvninvpmkteqkqeqetthknieedrkll
iqaaivrimkmrkvlkhqqllgevltqlssrfkprvpvikkcidiliekeylervdgekd
tysyla
Download sequence
Identical sequences 1ldk_B 1ldkB

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