SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1r4pA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1r4pA
Domain Number 1 Region: 2-295
Classification Level Classification E-value
Superfamily Ribosome inactivating proteins (RIP) 1.32e-77
Family Shiga toxin, A-chain 0.000000000168
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1r4pA   PDB: 1r4p   SUPERFAMILY: 1r4pA
Sequence length 297
Comment (A:)
Sequence
reftidfstqqsyvsslnsirteistplehisqgttsvsvinhtppgsyfavdirgldvy
qarfdhlrliieqnnlyvagfvntatntfyrfsdfthisvpgvttvsmttdssyttlqrv
aalersgmqisrhslvssylalmefsgntmtrdasravlrfvtvtaealrfrqiqrefrq
alsetapvytmtpgdvdltlnwgrisnvlpeyrgedgvrvgrisfnnisailgtvaviln
chhqgarsvravneesqpecqitgdrpvikinntlwesntaaaflnrksqflyttgk
Download sequence
Identical sequences 000074390|e2ga4A1|292.1.1.1|A:1-297 d1r4pa_ d2ga4a_ d4m1ua_ 1r4p_A 2ga4_A 4m1u_A 1r4pA

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