SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1t3iA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1t3iA
Domain Number 1 Region: 13-407
Classification Level Classification E-value
Superfamily PLP-dependent transferases 1.65e-260
Family Cystathionine synthase-like 0.00000000586
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1t3iA   PDB: 1t3i   SUPERFAMILY: 1t3iA
Sequence length 420
Comment (A:)
Sequence
MVALQIPSLAATVRQDFPILNQEINGHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVH
RGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDE
IITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISN
TLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGF
LYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTD
LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVD
QDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSDDDFTV
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Identical sequences L8APE0 Q55793
gi|16331747|ref|NP_442475.1| 1148.slr0077 gi|383492543|ref|YP_005410220.1| WP_010873773.1.11876 WP_010873773.1.1889 WP_010873773.1.18904 WP_010873773.1.33690 WP_010873773.1.35395 WP_010873773.1.47586 WP_010873773.1.99424 gi|16331747|ref|NP_442475.1| 1t3i_A 1t3i_B 1t3iA gi|383323490|ref|YP_005384344.1| gi|383326659|ref|YP_005387513.1|

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