SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1tbpA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1tbpA
Domain Number 1 Region: 91-175
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 4.39e-54
Family TATA-box binding protein (TBP), C-terminal domain 0.03
Further Details:      
 
Domain Number 2 Region: 6-85
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 1.61e-52
Family TATA-box binding protein (TBP), C-terminal domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1tbpA   PDB: 1tbp
Sequence length 180
Comment (A:)
Sequence
mgivptlqnivatvtlgcrldlktvalharnaeynpkrfaavimrirepkttalifasgk
mvvtgakseddsklasrkyariiqkigfaakftdfkiqnivgscdvkfpirleglafshg
tfssyepelfpgliyrmvkpkivllifvsgkivltgakqreeiyqafeaiypvlsefrkm
Download sequence
Identical sequences 1tbp_A 1tbp_B 1tbpA

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