SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 2ts1A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  2ts1A
Domain Number 1 Region: 6-320
Classification Level Classification E-value
Superfamily Nucleotidylyl transferase 2.29e-167
Family Class I aminoacyl-tRNA synthetases (RS), catalytic domain 0.0000000141
Further Details:      
 
Domain Number 2 Region: 321-418
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 2.42e-26
Family Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain 0.00000417
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2ts1A   PDB: 2ts1   SUPERFAMILY: 2ts1A
Sequence length 419
Comment (A:)
Sequence
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQ
AGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKI
KNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIETGISFTEFSYMMLQAYDFLRL
YETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAE
EVTKLVHGEEALRQAIRISEALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVS
AGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLEGRFTVIRRGKKKYYLIRYA
Download sequence
Identical sequences A0A0K9HL68 P00952
WP_033014498.1.20351 WP_033014498.1.30801 WP_033014498.1.44827 WP_033014498.1.46681 WP_033014498.1.54348 WP_033014498.1.56669 WP_033014498.1.58461 2ts1_A 3ts1_A 2ts1A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]