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Domain assignment for WP_011627055.1.71012 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_011627055.1.71012
Domain Number - Region: 166-288
Classification Level Classification E-value
Superfamily HlyD-like secretion proteins 0.000275
Family HlyD-like secretion proteins 0.013
Further Details:      
 
Domain Number - Region: 77-120
Classification Level Classification E-value
Superfamily Single hybrid motif 0.0279
Family Biotinyl/lipoyl-carrier proteins and domains 0.01
Further Details:      
 
Domain Number - Region: 364-404
Classification Level Classification E-value
Superfamily MoaD-related protein, C-terminal domain 0.0968
Family MoaD-related protein, C-terminal domain 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_011627055.1.71012
Sequence length 420
Comment MULTISPECIES: RND transporter MFP subunit [Shewanella]; AA=GCF_002157365.1; RF=na; TAX=24; STAX=24; NAME=Shewanella putrefaciens; strain=SA70; AL=Contig; RT=Major
Sequence
MIKDTSGQDKVLVPSTAKRLKLPLMIGGCTLLVSALVWASFGSDKVSQSISRSELTTATL
YVGTLTRDVATTGKIVAANAPILYSTEEGTVTLLSNPGDSVSKGDVVAKLDSPRLTNQLE
QAKSLLAGLESALERAKLDARRNQLQVNQTLDMASVDLEAADRESRRGDLLIQSKLISQI
DYEKGKDDLHKAKLKFKHAEQEVALTKDTLTFEVKNKALEMERQSLAVKELERQVDALNI
KAPVSGIIGNWLTEQKTRLSANQPILTVVDLSAYEAELAVPESYADELGLGMEVELSFGE
VKLMGKLSSISPEVRNREVTARVQFVQSESLKLRQNQRISARVLLEHRANVLMVKRGAFM
TSGGGDEVYQVEGDIATRREIKLGSTSMSQVEVIEGGKAGDEWVISSVEPFNHAEQVKMH
Download sequence
Identical sequences A0A252EXK0 Q0HRW0
WP_011627055.1.64021 WP_011627055.1.71012 60481.Shewmr7_3161 gi|114048652|ref|YP_739202.1|

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